Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH12P55289 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.11□□□□□ -0.15
CDH12P55289 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH12P55289 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CDH12P55289 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH12P55289 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CDH12P55289 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH12P55289 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDH12P55289 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDH12P55289 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH12P55289 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.11□□□□□ -0.15
CDH12P55289 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDH12P55289 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH12P55289 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.11□□□□□ -0.15
CDH12P55289 AC152010.1-201ENST00000415779 2006 ntBASIC14.11□□□□□ -0.15
CDH12P55289 TREML5P-201ENST00000421694 576 ntBASIC14.11□□□□□ -0.15
CDH12P55289 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.11□□□□□ -0.15
CDH12P55289 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.11□□□□□ -0.15
CDH12P55289 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.11□□□□□ -0.15
CDH12P55289 FAM86GP-201ENST00000448322 971 ntBASIC14.11□□□□□ -0.15
CDH12P55289 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.11□□□□□ -0.15
CDH12P55289 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDH12P55289 AC067863.1-201ENST00000494933 530 ntBASIC14.11□□□□□ -0.15
CDH12P55289 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.11□□□□□ -0.15
CDH12P55289 AC097493.3-201ENST00000509725 367 ntBASIC14.11□□□□□ -0.15
CDH12P55289 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.11□□□□□ -0.15
CDH12P55289 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
CDH12P55289 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CDH12P55289 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.11□□□□□ -0.15
CDH12P55289 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CDH12P55289 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH12P55289 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.11□□□□□ -0.15
CDH12P55289 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.11□□□□□ -0.15
CDH12P55289 AL158211.3-201ENST00000607385 239 ntBASIC14.11□□□□□ -0.15
CDH12P55289 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.11□□□□□ -0.15
CDH12P55289 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDH12P55289 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CDH12P55289 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CDH12P55289 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH12P55289 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.11□□□□□ -0.15
CDH12P55289 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.11□□□□□ -0.15
CDH12P55289 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
CDH12P55289 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH12P55289 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDH12P55289 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDH12P55289 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CDH12P55289 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDH12P55289 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDH12P55289 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.11□□□□□ -0.15
CDH12P55289 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDH12P55289 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.11□□□□□ -0.15
CDH12P55289 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CDH12P55289 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDH12P55289 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.1□□□□□ -0.15
CDH12P55289 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDH12P55289 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CDH12P55289 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH12P55289 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH12P55289 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.1□□□□□ -0.15
CDH12P55289 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.1□□□□□ -0.15
CDH12P55289 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH12P55289 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH12P55289 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.1□□□□□ -0.15
CDH12P55289 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH12P55289 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH12P55289 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH12P55289 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH12P55289 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.1□□□□□ -0.15
CDH12P55289 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH12P55289 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CDH12P55289 AC015802.1-201ENST00000588104 1449 ntBASIC14.1□□□□□ -0.15
CDH12P55289 AC100757.3-201ENST00000622361 1406 ntBASIC14.1□□□□□ -0.15
CDH12P55289 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
CDH12P55289 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH12P55289 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH12P55289 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH12P55289 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CDH12P55289 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.1□□□□□ -0.15
CDH12P55289 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.1□□□□□ -0.15
CDH12P55289 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.1□□□□□ -0.15
CDH12P55289 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CDH12P55289 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDH12P55289 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.1□□□□□ -0.15
CDH12P55289 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.1□□□□□ -0.15
CDH12P55289 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.1□□□□□ -0.15
CDH12P55289 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH12P55289 ZNF890P-202ENST00000530367 1156 ntBASIC14.1□□□□□ -0.15
CDH12P55289 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.1□□□□□ -0.15
CDH12P55289 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.1□□□□□ -0.15
CDH12P55289 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.1□□□□□ -0.15
CDH12P55289 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.1□□□□□ -0.15
CDH12P55289 AC023511.2-201ENST00000618803 211 ntBASIC14.1□□□□□ -0.15
CDH12P55289 AL590560.3-201ENST00000623350 461 ntBASIC14.1□□□□□ -0.15
CDH12P55289 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.1□□□□□ -0.15
CDH12P55289 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH12P55289 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDH12P55289 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.1□□□□□ -0.15
CDH12P55289 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDH12P55289 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDH12P55289 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms