Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
FREM3P0C091 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FREM3P0C091 AC139749.1-202ENST00000617529 3139 ntBASIC13.67□□□□□ -0.22
FREM3P0C091 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.67□□□□□ -0.22
FREM3P0C091 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
FREM3P0C091 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
FREM3P0C091 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.67□□□□□ -0.22
FREM3P0C091 AL136309.1-201ENST00000403917 691 ntBASIC13.67□□□□□ -0.22
FREM3P0C091 RN7SKP175-201ENST00000408472 289 ntBASIC13.67□□□□□ -0.22
FREM3P0C091 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.67□□□□□ -0.22
FREM3P0C091 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.67□□□□□ -0.22
FREM3P0C091 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.67□□□□□ -0.22
FREM3P0C091 HSPB1P2-201ENST00000448722 546 ntBASIC13.67□□□□□ -0.22
FREM3P0C091 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FREM3P0C091 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.67□□□□□ -0.22
FREM3P0C091 MIR4683-201ENST00000579659 81 ntBASIC13.67□□□□□ -0.22
FREM3P0C091 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.67□□□□□ -0.22
FREM3P0C091 LINC01101-201ENST00000622953 1884 ntBASIC13.67□□□□□ -0.22
FREM3P0C091 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FREM3P0C091 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
FREM3P0C091 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
FREM3P0C091 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
FREM3P0C091 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.67□□□□□ -0.22
FREM3P0C091 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
FREM3P0C091 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
FREM3P0C091 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FREM3P0C091 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
FREM3P0C091 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FREM3P0C091 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.67□□□□□ -0.22
FREM3P0C091 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
FREM3P0C091 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FREM3P0C091 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.66□□□□□ -0.22
FREM3P0C091 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FREM3P0C091 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FREM3P0C091 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
FREM3P0C091 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FREM3P0C091 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
FREM3P0C091 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FREM3P0C091 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
FREM3P0C091 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
FREM3P0C091 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
FREM3P0C091 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
FREM3P0C091 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FREM3P0C091 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.66□□□□□ -0.22
FREM3P0C091 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.66□□□□□ -0.22
FREM3P0C091 BTBD6P1-201ENST00000412176 1267 ntBASIC13.66□□□□□ -0.22
FREM3P0C091 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FREM3P0C091 C2orf69P2-201ENST00000562032 1123 ntBASIC13.66□□□□□ -0.22
FREM3P0C091 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.66□□□□□ -0.22
FREM3P0C091 AL118558.3-201ENST00000607414 1079 ntBASIC13.66□□□□□ -0.22
FREM3P0C091 ZACNP1-201ENST00000612259 710 ntBASIC13.66□□□□□ -0.22
FREM3P0C091 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.66□□□□□ -0.22
FREM3P0C091 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FREM3P0C091 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FREM3P0C091 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
FREM3P0C091 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.66□□□□□ -0.22
FREM3P0C091 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.66□□□□□ -0.22
FREM3P0C091 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FREM3P0C091 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.66□□□□□ -0.22
FREM3P0C091 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FREM3P0C091 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.66□□□□□ -0.22
FREM3P0C091 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
FREM3P0C091 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FREM3P0C091 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FREM3P0C091 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.66□□□□□ -0.22
FREM3P0C091 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.66□□□□□ -0.22
FREM3P0C091 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FREM3P0C091 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FREM3P0C091 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
FREM3P0C091 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FREM3P0C091 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
FREM3P0C091 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FREM3P0C091 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FREM3P0C091 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
FREM3P0C091 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FREM3P0C091 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FREM3P0C091 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
FREM3P0C091 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.66□□□□□ -0.22
FREM3P0C091 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
FREM3P0C091 HOMER2P2-201ENST00000451621 847 ntBASIC13.66□□□□□ -0.22
FREM3P0C091 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.66□□□□□ -0.22
FREM3P0C091 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.66□□□□□ -0.22
FREM3P0C091 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FREM3P0C091 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
FREM3P0C091 MIR4783-201ENST00000580343 82 ntBASIC13.66□□□□□ -0.22
FREM3P0C091 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.66□□□□□ -0.22
FREM3P0C091 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.66□□□□□ -0.22
FREM3P0C091 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FREM3P0C091 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FREM3P0C091 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC13.66□□□□□ -0.22
FREM3P0C091 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
FREM3P0C091 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
FREM3P0C091 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FREM3P0C091 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FREM3P0C091 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
FREM3P0C091 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FREM3P0C091 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FREM3P0C091 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.65□□□□□ -0.22
FREM3P0C091 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FREM3P0C091 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms