Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
PDE6DO43924 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
PDE6DO43924 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC11.73□□□□□ -0.53
PDE6DO43924 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
PDE6DO43924 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PDE6DO43924 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
PDE6DO43924 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC11.72□□□□□ -0.53
PDE6DO43924 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PDE6DO43924 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC11.72□□□□□ -0.53
PDE6DO43924 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC11.72□□□□□ -0.53
PDE6DO43924 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PDE6DO43924 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC11.72□□□□□ -0.53
PDE6DO43924 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PDE6DO43924 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
PDE6DO43924 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC11.72□□□□□ -0.53
PDE6DO43924 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PDE6DO43924 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PDE6DO43924 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC11.72□□□□□ -0.53
PDE6DO43924 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC11.72□□□□□ -0.53
PDE6DO43924 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PDE6DO43924 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PDE6DO43924 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
PDE6DO43924 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PDE6DO43924 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PDE6DO43924 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC11.72□□□□□ -0.53
PDE6DO43924 FAM220BP-201ENST00000377689 816 ntBASIC11.72□□□□□ -0.53
PDE6DO43924 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
PDE6DO43924 CBR1-202ENST00000399191 838 ntTSL 3 BASIC11.72□□□□□ -0.53
PDE6DO43924 PP14571-201ENST00000404327 934 ntTSL 2 BASIC11.72□□□□□ -0.53
PDE6DO43924 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PDE6DO43924 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PDE6DO43924 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
PDE6DO43924 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC11.72□□□□□ -0.53
PDE6DO43924 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC11.72□□□□□ -0.53
PDE6DO43924 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC11.72□□□□□ -0.53
PDE6DO43924 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC11.72□□□□□ -0.53
PDE6DO43924 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC11.72□□□□□ -0.53
PDE6DO43924 AL121772.3-201ENST00000610840 674 ntBASIC11.72□□□□□ -0.53
PDE6DO43924 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PDE6DO43924 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC11.72□□□□□ -0.53
PDE6DO43924 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC11.72□□□□□ -0.53
PDE6DO43924 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
PDE6DO43924 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC11.72□□□□□ -0.53
PDE6DO43924 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
PDE6DO43924 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PDE6DO43924 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
PDE6DO43924 ADK-205ENST00000539909 1866 ntTSL 2 BASIC11.72□□□□□ -0.53
PDE6DO43924 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PDE6DO43924 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
PDE6DO43924 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
PDE6DO43924 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
PDE6DO43924 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
PDE6DO43924 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PDE6DO43924 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
PDE6DO43924 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PDE6DO43924 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
PDE6DO43924 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PDE6DO43924 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC11.71□□□□□ -0.53
PDE6DO43924 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PDE6DO43924 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
PDE6DO43924 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC11.71□□□□□ -0.53
PDE6DO43924 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
PDE6DO43924 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
PDE6DO43924 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PDE6DO43924 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC11.71□□□□□ -0.53
PDE6DO43924 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
PDE6DO43924 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC11.71□□□□□ -0.53
PDE6DO43924 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC11.71□□□□□ -0.53
PDE6DO43924 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
PDE6DO43924 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
PDE6DO43924 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PDE6DO43924 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
PDE6DO43924 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
PDE6DO43924 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC11.71□□□□□ -0.53
PDE6DO43924 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PDE6DO43924 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
PDE6DO43924 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PDE6DO43924 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PDE6DO43924 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PDE6DO43924 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PDE6DO43924 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
PDE6DO43924 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC11.71□□□□□ -0.53
PDE6DO43924 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC11.71□□□□□ -0.53
PDE6DO43924 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC11.71□□□□□ -0.53
PDE6DO43924 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
PDE6DO43924 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC11.71□□□□□ -0.53
PDE6DO43924 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC11.71□□□□□ -0.53
PDE6DO43924 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC11.71□□□□□ -0.53
PDE6DO43924 AC015910.1-201ENST00000579400 975 ntBASIC11.71□□□□□ -0.53
PDE6DO43924 AC023141.13-201ENST00000604991 943 ntBASIC11.71□□□□□ -0.53
PDE6DO43924 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
PDE6DO43924 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC11.71□□□□□ -0.54
PDE6DO43924 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
PDE6DO43924 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
PDE6DO43924 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
PDE6DO43924 FAM90A12P-201ENST00000519497 2375 ntBASIC11.71□□□□□ -0.54
PDE6DO43924 FAM90A24P-201ENST00000520792 2369 ntBASIC11.71□□□□□ -0.54
PDE6DO43924 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
PDE6DO43924 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
PDE6DO43924 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms