Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SURF4O15260 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.66□□□□□ -0.22
SURF4O15260 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.66□□□□□ -0.22
SURF4O15260 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.66□□□□□ -0.22
SURF4O15260 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.66□□□□□ -0.22
SURF4O15260 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
SURF4O15260 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.66□□□□□ -0.22
SURF4O15260 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SURF4O15260 AL138828.2-201ENST00000615812 383 ntBASIC13.66□□□□□ -0.22
SURF4O15260 AC093512.1-201ENST00000617969 520 ntBASIC13.66□□□□□ -0.22
SURF4O15260 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.66□□□□□ -0.22
SURF4O15260 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SURF4O15260 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SURF4O15260 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.66□□□□□ -0.22
SURF4O15260 AC011474.4-201ENST00000623523 2076 ntBASIC13.66□□□□□ -0.22
SURF4O15260 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SURF4O15260 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SURF4O15260 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.66□□□□□ -0.22
SURF4O15260 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SURF4O15260 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SURF4O15260 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SURF4O15260 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SURF4O15260 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.66□□□□□ -0.22
SURF4O15260 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SURF4O15260 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SURF4O15260 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SURF4O15260 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
SURF4O15260 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SURF4O15260 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SURF4O15260 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SURF4O15260 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.66□□□□□ -0.22
SURF4O15260 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SURF4O15260 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SURF4O15260 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SURF4O15260 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SURF4O15260 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.65□□□□□ -0.22
SURF4O15260 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.65□□□□□ -0.22
SURF4O15260 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SURF4O15260 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.65□□□□□ -0.22
SURF4O15260 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SURF4O15260 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
SURF4O15260 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SURF4O15260 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SURF4O15260 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.65□□□□□ -0.22
SURF4O15260 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.65□□□□□ -0.22
SURF4O15260 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SURF4O15260 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SURF4O15260 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.65□□□□□ -0.22
SURF4O15260 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SURF4O15260 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SURF4O15260 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SURF4O15260 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.65□□□□□ -0.22
SURF4O15260 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.65□□□□□ -0.22
SURF4O15260 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SURF4O15260 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.65□□□□□ -0.22
SURF4O15260 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SURF4O15260 BASP1P1-201ENST00000430708 665 ntBASIC13.65□□□□□ -0.22
SURF4O15260 AL512638.1-201ENST00000457493 794 ntBASIC13.65□□□□□ -0.22
SURF4O15260 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.65□□□□□ -0.22
SURF4O15260 GAPDHP40-201ENST00000505218 1006 ntBASIC13.65□□□□□ -0.22
SURF4O15260 RNA5SP421-201ENST00000516864 134 ntBASIC13.65□□□□□ -0.22
SURF4O15260 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.65□□□□□ -0.22
SURF4O15260 AC027369.6-201ENST00000525520 931 ntBASIC13.65□□□□□ -0.22
SURF4O15260 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.65□□□□□ -0.22
SURF4O15260 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.65□□□□□ -0.22
SURF4O15260 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.65□□□□□ -0.22
SURF4O15260 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SURF4O15260 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SURF4O15260 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SURF4O15260 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.65□□□□□ -0.22
SURF4O15260 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.65□□□□□ -0.22
SURF4O15260 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.65□□□□□ -0.22
SURF4O15260 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SURF4O15260 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.65□□□□□ -0.22
SURF4O15260 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.65□□□□□ -0.22
SURF4O15260 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SURF4O15260 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SURF4O15260 AL137783.1-201ENST00000623494 1896 ntBASIC13.65□□□□□ -0.22
SURF4O15260 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SURF4O15260 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SURF4O15260 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SURF4O15260 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SURF4O15260 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SURF4O15260 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
SURF4O15260 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.23
SURF4O15260 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SURF4O15260 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SURF4O15260 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SURF4O15260 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SURF4O15260 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SURF4O15260 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SURF4O15260 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
SURF4O15260 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.64□□□□□ -0.23
SURF4O15260 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SURF4O15260 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SURF4O15260 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SURF4O15260 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SURF4O15260 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SURF4O15260 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SURF4O15260 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms