Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 PNPO-217ENST00000642017 3465 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
LINC01558Q9Y6Z2 TAOK2-201ENST00000279394 4246 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 MGAT4EP-201ENST00000330493 2810 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 SRRM5-201ENST00000417606 2381 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 TXNRD1-201ENST00000354940 4082 ntAPPRIS ALT1 TSL 5 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 GUCY2EP-203ENST00000531117 1918 ntBASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 PISD-202ENST00000382151 2669 ntAPPRIS P2 TSL 5 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 KCNAB1-215ENST00000618897 4437 ntTSL 5 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 CCNG1-201ENST00000340828 2458 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 CHD1L-202ENST00000369258 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 CTCFL-204ENST00000422869 2966 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 POU2F2-201ENST00000342301 3730 ntTSL 5 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 AL645937.6-201ENST00000641122 3727 ntBASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 P3H2-201ENST00000319332 3509 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 PCDHA6-201ENST00000378126 3267 ntBASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 ACIN1-222ENST00000557515 2751 ntTSL 5 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 HBZP1-201ENST00000354915 429 ntBASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 DPM2-202ENST00000373110 738 ntTSL 2 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 SEC1P-202ENST00000473944 940 ntBASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 SLC29A4P2-201ENST00000504749 1089 ntBASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 CYP2A7P1-201ENST00000595391 815 ntBASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 AP000692.2-201ENST00000608391 879 ntBASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 AL353801.3-201ENST00000609898 542 ntBASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 ANKRD20A8P-203ENST00000641373 517 ntBASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 ALOXE3-201ENST00000318227 3053 ntTSL 2 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 AREL1-201ENST00000356357 5456 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 RYR1-202ENST00000359596 15117 ntAPPRIS P3 TSL 5 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 MRVI1-209ENST00000531107 2887 ntAPPRIS P3 TSL 2 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 SLC44A4-210ENST00000544672 2634 ntTSL 2 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 AC007787.1-201ENST00000588095 1583 ntBASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 RPS6KA1-220ENST00000531382 2359 ntTSL 2 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 YTHDF2-208ENST00000541996 2719 ntTSL 2 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 WT1-AS-201ENST00000395900 3828 ntTSL 2 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 NAPB-207ENST00000617876 3883 ntAPPRIS ALT1 TSL 2 BASIC7.7□□□□□ -1.18
LINC01558Q9Y6Z2 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms