Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTDP1Q9Y5B0 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTDP1Q9Y5B0 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.41■□□□□ 0.38
CTDP1Q9Y5B0 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTDP1Q9Y5B0 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.41■□□□□ 0.38
CTDP1Q9Y5B0 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTDP1Q9Y5B0 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CTDP1Q9Y5B0 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CTDP1Q9Y5B0 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.41■□□□□ 0.38
CTDP1Q9Y5B0 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTDP1Q9Y5B0 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTDP1Q9Y5B0 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTDP1Q9Y5B0 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTDP1Q9Y5B0 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CTDP1Q9Y5B0 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.4■□□□□ 0.38
CTDP1Q9Y5B0 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTDP1Q9Y5B0 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTDP1Q9Y5B0 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTDP1Q9Y5B0 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTDP1Q9Y5B0 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTDP1Q9Y5B0 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTDP1Q9Y5B0 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTDP1Q9Y5B0 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTDP1Q9Y5B0 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.4■□□□□ 0.38
CTDP1Q9Y5B0 AC138028.6-201ENST00000616106 1482 ntBASIC17.4■□□□□ 0.38
CTDP1Q9Y5B0 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CTDP1Q9Y5B0 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTDP1Q9Y5B0 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTDP1Q9Y5B0 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CTDP1Q9Y5B0 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTDP1Q9Y5B0 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.4■□□□□ 0.38
CTDP1Q9Y5B0 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.4■□□□□ 0.38
CTDP1Q9Y5B0 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.4■□□□□ 0.38
CTDP1Q9Y5B0 AL606495.2-201ENST00000605867 535 ntBASIC17.4■□□□□ 0.38
CTDP1Q9Y5B0 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.4■□□□□ 0.38
CTDP1Q9Y5B0 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTDP1Q9Y5B0 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTDP1Q9Y5B0 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.4■□□□□ 0.38
CTDP1Q9Y5B0 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTDP1Q9Y5B0 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC17.4■□□□□ 0.38
CTDP1Q9Y5B0 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.4■□□□□ 0.38
CTDP1Q9Y5B0 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CTDP1Q9Y5B0 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC17.39■□□□□ 0.38
CTDP1Q9Y5B0 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC17.39■□□□□ 0.38
CTDP1Q9Y5B0 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTDP1Q9Y5B0 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTDP1Q9Y5B0 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTDP1Q9Y5B0 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTDP1Q9Y5B0 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.39■□□□□ 0.37
CTDP1Q9Y5B0 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CTDP1Q9Y5B0 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.39■□□□□ 0.37
CTDP1Q9Y5B0 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTDP1Q9Y5B0 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTDP1Q9Y5B0 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CTDP1Q9Y5B0 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTDP1Q9Y5B0 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.39■□□□□ 0.37
CTDP1Q9Y5B0 SLC25A24P2-201ENST00000415059 510 ntBASIC17.39■□□□□ 0.37
CTDP1Q9Y5B0 EIF4HP1-201ENST00000453115 687 ntBASIC17.39■□□□□ 0.37
CTDP1Q9Y5B0 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.39■□□□□ 0.37
CTDP1Q9Y5B0 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.39■□□□□ 0.37
CTDP1Q9Y5B0 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.39■□□□□ 0.37
CTDP1Q9Y5B0 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.39■□□□□ 0.37
CTDP1Q9Y5B0 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTDP1Q9Y5B0 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTDP1Q9Y5B0 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTDP1Q9Y5B0 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTDP1Q9Y5B0 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTDP1Q9Y5B0 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTDP1Q9Y5B0 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.39■□□□□ 0.37
CTDP1Q9Y5B0 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.39■□□□□ 0.37
CTDP1Q9Y5B0 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTDP1Q9Y5B0 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTDP1Q9Y5B0 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTDP1Q9Y5B0 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CTDP1Q9Y5B0 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTDP1Q9Y5B0 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTDP1Q9Y5B0 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.39■□□□□ 0.37
CTDP1Q9Y5B0 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTDP1Q9Y5B0 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 AL359258.3-201ENST00000622910 2331 ntBASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 AC020658.6-201ENST00000623564 1870 ntBASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms