Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
IFT52Q9Y366 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IFT52Q9Y366 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
IFT52Q9Y366 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
IFT52Q9Y366 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
IFT52Q9Y366 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
IFT52Q9Y366 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.22□□□□□ -0.13
IFT52Q9Y366 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
IFT52Q9Y366 MIR943-201ENST00000401286 94 ntBASIC14.22□□□□□ -0.13
IFT52Q9Y366 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.22□□□□□ -0.13
IFT52Q9Y366 TREML5P-201ENST00000421694 576 ntBASIC14.22□□□□□ -0.13
IFT52Q9Y366 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.22□□□□□ -0.13
IFT52Q9Y366 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.22□□□□□ -0.13
IFT52Q9Y366 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.22□□□□□ -0.13
IFT52Q9Y366 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IFT52Q9Y366 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.22□□□□□ -0.13
IFT52Q9Y366 AC093028.1-201ENST00000622998 982 ntBASIC14.22□□□□□ -0.13
IFT52Q9Y366 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.22□□□□□ -0.13
IFT52Q9Y366 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
IFT52Q9Y366 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
IFT52Q9Y366 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
IFT52Q9Y366 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.22□□□□□ -0.13
IFT52Q9Y366 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IFT52Q9Y366 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
IFT52Q9Y366 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IFT52Q9Y366 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.22□□□□□ -0.13
IFT52Q9Y366 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IFT52Q9Y366 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
IFT52Q9Y366 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IFT52Q9Y366 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
IFT52Q9Y366 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
IFT52Q9Y366 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IFT52Q9Y366 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IFT52Q9Y366 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
IFT52Q9Y366 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IFT52Q9Y366 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
IFT52Q9Y366 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IFT52Q9Y366 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
IFT52Q9Y366 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IFT52Q9Y366 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IFT52Q9Y366 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.21□□□□□ -0.13
IFT52Q9Y366 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.21□□□□□ -0.13
IFT52Q9Y366 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IFT52Q9Y366 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IFT52Q9Y366 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IFT52Q9Y366 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IFT52Q9Y366 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IFT52Q9Y366 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.21□□□□□ -0.13
IFT52Q9Y366 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
IFT52Q9Y366 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.21□□□□□ -0.13
IFT52Q9Y366 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.21□□□□□ -0.13
IFT52Q9Y366 MEIS3P1-201ENST00000495167 958 ntBASIC14.21□□□□□ -0.13
IFT52Q9Y366 AC004066.1-201ENST00000502488 802 ntBASIC14.21□□□□□ -0.13
IFT52Q9Y366 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.21□□□□□ -0.13
IFT52Q9Y366 IGHV3-42-201ENST00000520410 361 ntBASIC14.21□□□□□ -0.13
IFT52Q9Y366 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.21□□□□□ -0.13
IFT52Q9Y366 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.21□□□□□ -0.13
IFT52Q9Y366 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.21□□□□□ -0.13
IFT52Q9Y366 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.21□□□□□ -0.13
IFT52Q9Y366 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.21□□□□□ -0.13
IFT52Q9Y366 SAMD11P1-201ENST00000571429 661 ntBASIC14.21□□□□□ -0.13
IFT52Q9Y366 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.21□□□□□ -0.13
IFT52Q9Y366 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
IFT52Q9Y366 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IFT52Q9Y366 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
IFT52Q9Y366 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
IFT52Q9Y366 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
IFT52Q9Y366 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
IFT52Q9Y366 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
IFT52Q9Y366 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
IFT52Q9Y366 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.21□□□□□ -0.14
IFT52Q9Y366 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.21□□□□□ -0.14
IFT52Q9Y366 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
IFT52Q9Y366 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
IFT52Q9Y366 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
IFT52Q9Y366 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
IFT52Q9Y366 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
IFT52Q9Y366 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFT52Q9Y366 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFT52Q9Y366 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFT52Q9Y366 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.2□□□□□ -0.14
IFT52Q9Y366 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
IFT52Q9Y366 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
IFT52Q9Y366 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFT52Q9Y366 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
IFT52Q9Y366 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFT52Q9Y366 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFT52Q9Y366 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
IFT52Q9Y366 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
IFT52Q9Y366 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
IFT52Q9Y366 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFT52Q9Y366 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.2□□□□□ -0.14
IFT52Q9Y366 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
IFT52Q9Y366 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFT52Q9Y366 BX640514.1-201ENST00000583223 1918 ntBASIC14.2□□□□□ -0.14
IFT52Q9Y366 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.2□□□□□ -0.14
IFT52Q9Y366 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFT52Q9Y366 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFT52Q9Y366 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFT52Q9Y366 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms