Protein–RNA interactions for Protein: Q9NUN5

LMBRD1, Probable lysosomal cobalamin transporter, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMBRD1Q9NUN5 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.29■□□□□ 0.36
LMBRD1Q9NUN5 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.29■□□□□ 0.36
LMBRD1Q9NUN5 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.29■□□□□ 0.36
LMBRD1Q9NUN5 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.29■□□□□ 0.36
LMBRD1Q9NUN5 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.29■□□□□ 0.36
LMBRD1Q9NUN5 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.29■□□□□ 0.36
LMBRD1Q9NUN5 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LMBRD1Q9NUN5 AL512361.1-201ENST00000554200 418 ntBASIC17.29■□□□□ 0.36
LMBRD1Q9NUN5 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
LMBRD1Q9NUN5 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
LMBRD1Q9NUN5 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.29■□□□□ 0.36
LMBRD1Q9NUN5 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.29■□□□□ 0.36
LMBRD1Q9NUN5 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.29■□□□□ 0.36
LMBRD1Q9NUN5 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC17.29■□□□□ 0.36
LMBRD1Q9NUN5 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC17.29■□□□□ 0.36
LMBRD1Q9NUN5 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
LMBRD1Q9NUN5 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LMBRD1Q9NUN5 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LMBRD1Q9NUN5 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC17.29■□□□□ 0.36
LMBRD1Q9NUN5 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC17.29■□□□□ 0.36
LMBRD1Q9NUN5 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.29■□□□□ 0.36
LMBRD1Q9NUN5 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LMBRD1Q9NUN5 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LMBRD1Q9NUN5 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LMBRD1Q9NUN5 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LMBRD1Q9NUN5 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
LMBRD1Q9NUN5 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LMBRD1Q9NUN5 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
LMBRD1Q9NUN5 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LMBRD1Q9NUN5 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC17.28■□□□□ 0.36
LMBRD1Q9NUN5 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LMBRD1Q9NUN5 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.28■□□□□ 0.36
LMBRD1Q9NUN5 AC068760.1-201ENST00000493579 1953 ntBASIC17.28■□□□□ 0.36
LMBRD1Q9NUN5 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
LMBRD1Q9NUN5 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LMBRD1Q9NUN5 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LMBRD1Q9NUN5 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LMBRD1Q9NUN5 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LMBRD1Q9NUN5 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LMBRD1Q9NUN5 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.28■□□□□ 0.36
LMBRD1Q9NUN5 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LMBRD1Q9NUN5 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LMBRD1Q9NUN5 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.28■□□□□ 0.36
LMBRD1Q9NUN5 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.28■□□□□ 0.36
LMBRD1Q9NUN5 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.28■□□□□ 0.36
LMBRD1Q9NUN5 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.28■□□□□ 0.36
LMBRD1Q9NUN5 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.28■□□□□ 0.36
LMBRD1Q9NUN5 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.28■□□□□ 0.36
LMBRD1Q9NUN5 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.28■□□□□ 0.36
LMBRD1Q9NUN5 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LMBRD1Q9NUN5 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.28■□□□□ 0.36
LMBRD1Q9NUN5 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LMBRD1Q9NUN5 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LMBRD1Q9NUN5 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
LMBRD1Q9NUN5 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC17.28■□□□□ 0.36
LMBRD1Q9NUN5 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LMBRD1Q9NUN5 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 AC090643.2-201ENST00000623442 2029 ntBASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 AC004461.1-201ENST00000412461 403 ntBASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 SERBP1P3-201ENST00000459980 809 ntBASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 BX640515.1-201ENST00000617215 977 ntBASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 AL513210.1-201ENST00000629608 234 ntBASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 CETN4P-206ENST00000642099 2168 ntBASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 AL158070.2-201ENST00000623713 1621 ntBASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LMBRD1Q9NUN5 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LMBRD1Q9NUN5 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms