Protein–RNA interactions for Protein: Q9NPR2

SEMA4B, Semaphorin-4B, humanhuman

Predicted RBP Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4BQ9NPR2 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SEMA4BQ9NPR2 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
SEMA4BQ9NPR2 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SEMA4BQ9NPR2 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
SEMA4BQ9NPR2 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.83□□□□□ -0.04
SEMA4BQ9NPR2 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.83□□□□□ -0.04
SEMA4BQ9NPR2 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SEMA4BQ9NPR2 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SEMA4BQ9NPR2 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SEMA4BQ9NPR2 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 FAM86LP-201ENST00000478302 853 ntBASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 AC004890.2-204ENST00000481968 304 ntBASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 AC104794.3-201ENST00000566840 1248 ntBASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 AL137783.1-201ENST00000623494 1896 ntBASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 DRD5P1-201ENST00000456605 1438 ntBASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SEMA4BQ9NPR2 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 AL158070.2-201ENST00000623713 1621 ntBASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 MIR661-201ENST00000384842 89 ntBASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 AC036164.1-201ENST00000570544 333 ntBASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 MIR4745-201ENST00000577608 62 ntBASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 AC107373.2-201ENST00000607735 490 ntBASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 AC004790.1-201ENST00000612686 536 ntBASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 AJ011932.1-201ENST00000621707 465 ntBASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms