Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
S1PR3Q99500 DOC2GP-202ENST00000514950 1163 ntBASIC12.52□□□□□ -0.41
S1PR3Q99500 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.52□□□□□ -0.41
S1PR3Q99500 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.52□□□□□ -0.41
S1PR3Q99500 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC12.52□□□□□ -0.41
S1PR3Q99500 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
S1PR3Q99500 AC104794.3-201ENST00000566840 1248 ntBASIC12.52□□□□□ -0.41
S1PR3Q99500 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.52□□□□□ -0.41
S1PR3Q99500 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC12.52□□□□□ -0.41
S1PR3Q99500 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
S1PR3Q99500 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
S1PR3Q99500 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
S1PR3Q99500 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
S1PR3Q99500 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.52□□□□□ -0.41
S1PR3Q99500 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
S1PR3Q99500 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC12.52□□□□□ -0.41
S1PR3Q99500 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.52□□□□□ -0.41
S1PR3Q99500 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
S1PR3Q99500 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
S1PR3Q99500 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
S1PR3Q99500 AC015656.1-201ENST00000624209 3578 ntBASIC12.52□□□□□ -0.41
S1PR3Q99500 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
S1PR3Q99500 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
S1PR3Q99500 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC12.52□□□□□ -0.41
S1PR3Q99500 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.52□□□□□ -0.41
S1PR3Q99500 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
S1PR3Q99500 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
S1PR3Q99500 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
S1PR3Q99500 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
S1PR3Q99500 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
S1PR3Q99500 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.52□□□□□ -0.41
S1PR3Q99500 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
S1PR3Q99500 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
S1PR3Q99500 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.51□□□□□ -0.41
S1PR3Q99500 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
S1PR3Q99500 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.51□□□□□ -0.41
S1PR3Q99500 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
S1PR3Q99500 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
S1PR3Q99500 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
S1PR3Q99500 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.51□□□□□ -0.41
S1PR3Q99500 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.51□□□□□ -0.41
S1PR3Q99500 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
S1PR3Q99500 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
S1PR3Q99500 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
S1PR3Q99500 MIR193BHG-211ENST00000641433 5365 ntBASIC12.51□□□□□ -0.41
S1PR3Q99500 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
S1PR3Q99500 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
S1PR3Q99500 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
S1PR3Q99500 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
S1PR3Q99500 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
S1PR3Q99500 TP73-201ENST00000346387 4854 ntTSL 5 BASIC12.51□□□□□ -0.41
S1PR3Q99500 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.51□□□□□ -0.41
S1PR3Q99500 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.51□□□□□ -0.41
S1PR3Q99500 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
S1PR3Q99500 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
S1PR3Q99500 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
S1PR3Q99500 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
S1PR3Q99500 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
S1PR3Q99500 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
S1PR3Q99500 WDR53-203ENST00000429115 683 ntTSL 2 BASIC12.51□□□□□ -0.41
S1PR3Q99500 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
S1PR3Q99500 SPDYE18-201ENST00000510091 1050 ntBASIC12.51□□□□□ -0.41
S1PR3Q99500 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
S1PR3Q99500 TPRX2P-201ENST00000535362 881 ntBASIC12.51□□□□□ -0.41
S1PR3Q99500 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.51□□□□□ -0.41
S1PR3Q99500 RARRES2P5-201ENST00000564013 466 ntBASIC12.51□□□□□ -0.41
S1PR3Q99500 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
S1PR3Q99500 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC12.51□□□□□ -0.41
S1PR3Q99500 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
S1PR3Q99500 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.51□□□□□ -0.41
S1PR3Q99500 AC023908.3-201ENST00000564211 3047 ntBASIC12.51□□□□□ -0.41
S1PR3Q99500 AC005089.1-201ENST00000619486 2241 ntBASIC12.51□□□□□ -0.41
S1PR3Q99500 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
S1PR3Q99500 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.51□□□□□ -0.41
S1PR3Q99500 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
S1PR3Q99500 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.51□□□□□ -0.41
S1PR3Q99500 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.51□□□□□ -0.41
S1PR3Q99500 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
S1PR3Q99500 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
S1PR3Q99500 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
S1PR3Q99500 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.51□□□□□ -0.41
S1PR3Q99500 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
S1PR3Q99500 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
S1PR3Q99500 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
S1PR3Q99500 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
S1PR3Q99500 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
S1PR3Q99500 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
S1PR3Q99500 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
S1PR3Q99500 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
S1PR3Q99500 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
S1PR3Q99500 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
S1PR3Q99500 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.5□□□□□ -0.41
S1PR3Q99500 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
S1PR3Q99500 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
S1PR3Q99500 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
S1PR3Q99500 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
S1PR3Q99500 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
S1PR3Q99500 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
S1PR3Q99500 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.5□□□□□ -0.41
S1PR3Q99500 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms