Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 API5-211ENST00000534695 560 ntTSL 5 BASIC14.33□□□□□ -0.12
COL21A1Q96P44 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
COL21A1Q96P44 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.33□□□□□ -0.12
COL21A1Q96P44 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.33□□□□□ -0.12
COL21A1Q96P44 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.33□□□□□ -0.12
COL21A1Q96P44 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.33□□□□□ -0.12
COL21A1Q96P44 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
COL21A1Q96P44 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
COL21A1Q96P44 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL21A1Q96P44 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL21A1Q96P44 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.33□□□□□ -0.12
COL21A1Q96P44 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
COL21A1Q96P44 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.33□□□□□ -0.12
COL21A1Q96P44 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
COL21A1Q96P44 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL21A1Q96P44 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
COL21A1Q96P44 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL21A1Q96P44 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL21A1Q96P44 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL21A1Q96P44 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL21A1Q96P44 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL21A1Q96P44 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
COL21A1Q96P44 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
COL21A1Q96P44 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.32□□□□□ -0.12
COL21A1Q96P44 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
COL21A1Q96P44 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.32□□□□□ -0.12
COL21A1Q96P44 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL21A1Q96P44 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
COL21A1Q96P44 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
COL21A1Q96P44 AC015656.1-201ENST00000624209 3578 ntBASIC14.32□□□□□ -0.12
COL21A1Q96P44 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL21A1Q96P44 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
COL21A1Q96P44 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
COL21A1Q96P44 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
COL21A1Q96P44 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
COL21A1Q96P44 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL21A1Q96P44 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL21A1Q96P44 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL21A1Q96P44 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
COL21A1Q96P44 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL21A1Q96P44 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL21A1Q96P44 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL21A1Q96P44 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
COL21A1Q96P44 RPL13AP25-201ENST00000484130 612 ntBASIC14.32□□□□□ -0.12
COL21A1Q96P44 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.32□□□□□ -0.12
COL21A1Q96P44 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.32□□□□□ -0.12
COL21A1Q96P44 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.32□□□□□ -0.12
COL21A1Q96P44 AC123567.1-201ENST00000548294 1261 ntBASIC14.32□□□□□ -0.12
COL21A1Q96P44 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.32□□□□□ -0.12
COL21A1Q96P44 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
COL21A1Q96P44 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.32□□□□□ -0.12
COL21A1Q96P44 AC140912.1-201ENST00000577171 1054 ntBASIC14.32□□□□□ -0.12
COL21A1Q96P44 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.32□□□□□ -0.12
COL21A1Q96P44 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.32□□□□□ -0.12
COL21A1Q96P44 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL21A1Q96P44 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL21A1Q96P44 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
COL21A1Q96P44 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL21A1Q96P44 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL21A1Q96P44 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL21A1Q96P44 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL21A1Q96P44 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
COL21A1Q96P44 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.32□□□□□ -0.12
COL21A1Q96P44 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.32□□□□□ -0.12
COL21A1Q96P44 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL21A1Q96P44 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL21A1Q96P44 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
COL21A1Q96P44 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
COL21A1Q96P44 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.32□□□□□ -0.12
COL21A1Q96P44 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL21A1Q96P44 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.31□□□□□ -0.12
COL21A1Q96P44 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
COL21A1Q96P44 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.31□□□□□ -0.12
COL21A1Q96P44 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
COL21A1Q96P44 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.31□□□□□ -0.12
COL21A1Q96P44 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
COL21A1Q96P44 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL21A1Q96P44 ST20-AS1-201ENST00000560255 4223 ntBASIC14.31□□□□□ -0.12
COL21A1Q96P44 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COL21A1Q96P44 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.31□□□□□ -0.12
COL21A1Q96P44 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.31□□□□□ -0.12
COL21A1Q96P44 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL21A1Q96P44 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL21A1Q96P44 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL21A1Q96P44 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.31□□□□□ -0.12
COL21A1Q96P44 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL21A1Q96P44 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL21A1Q96P44 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL21A1Q96P44 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.31□□□□□ -0.12
COL21A1Q96P44 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL21A1Q96P44 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.31□□□□□ -0.12
COL21A1Q96P44 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
COL21A1Q96P44 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
COL21A1Q96P44 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
COL21A1Q96P44 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL21A1Q96P44 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COL21A1Q96P44 MYCLP2-201ENST00000449268 967 ntBASIC14.31□□□□□ -0.12
COL21A1Q96P44 CRB3P1-201ENST00000449338 276 ntBASIC14.31□□□□□ -0.12
COL21A1Q96P44 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.31□□□□□ -0.12
COL21A1Q96P44 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms