Protein–RNA interactions for Protein: Q8WWF3

SSMEM1, Serine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSMEM1Q8WWF3 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SSMEM1Q8WWF3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SSMEM1Q8WWF3 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSMEM1Q8WWF3 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
SSMEM1Q8WWF3 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSMEM1Q8WWF3 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 AC018665.1-201ENST00000622927 1362 ntBASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 RAC2-202ENST00000401529 569 ntTSL 4 BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 HLA-V-201ENST00000429037 534 ntBASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 KRT223P-202ENST00000449164 1292 ntBASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 AC104989.1-201ENST00000519711 778 ntBASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 SLC25A47P1-201ENST00000531577 414 ntBASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 AC120045.2-201ENST00000567334 178 ntBASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 MIR5189-201ENST00000577370 114 ntBASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 COX11-210ENST00000639671 696 ntBASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSMEM1Q8WWF3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.58□□□□□ -0.39
SSMEM1Q8WWF3 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.58□□□□□ -0.39
SSMEM1Q8WWF3 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.58□□□□□ -0.39
SSMEM1Q8WWF3 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
SSMEM1Q8WWF3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.58□□□□□ -0.39
SSMEM1Q8WWF3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSMEM1Q8WWF3 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SSMEM1Q8WWF3 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.58□□□□□ -0.4
SSMEM1Q8WWF3 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
SSMEM1Q8WWF3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSMEM1Q8WWF3 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
SSMEM1Q8WWF3 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
SSMEM1Q8WWF3 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSMEM1Q8WWF3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.58□□□□□ -0.4
SSMEM1Q8WWF3 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSMEM1Q8WWF3 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSMEM1Q8WWF3 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSMEM1Q8WWF3 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSMEM1Q8WWF3 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSMEM1Q8WWF3 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SSMEM1Q8WWF3 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
SSMEM1Q8WWF3 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms