Protein–RNA interactions for Protein: Q86YD7

FAM90A1, Protein FAM90A1, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A1Q86YD7 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM90A1Q86YD7 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.68□□□□□ -0.38
FAM90A1Q86YD7 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM90A1Q86YD7 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
FAM90A1Q86YD7 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM90A1Q86YD7 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.68□□□□□ -0.38
FAM90A1Q86YD7 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM90A1Q86YD7 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
FAM90A1Q86YD7 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC12.68□□□□□ -0.38
FAM90A1Q86YD7 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FAM90A1Q86YD7 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM90A1Q86YD7 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.68□□□□□ -0.38
FAM90A1Q86YD7 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 AC023090.2-201ENST00000625182 2110 ntBASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 KRT17P8-201ENST00000540749 863 ntBASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 ORC6-206ENST00000568364 888 ntTSL 5 BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 AC106886.1-201ENST00000568660 600 ntBASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 AC025279.2-201ENST00000569730 653 ntBASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 AC239800.4-201ENST00000603712 296 ntBASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FAM90A1Q86YD7 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.66□□□□□ -0.38
FAM90A1Q86YD7 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.66□□□□□ -0.38
FAM90A1Q86YD7 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FAM90A1Q86YD7 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FAM90A1Q86YD7 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FAM90A1Q86YD7 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
FAM90A1Q86YD7 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FAM90A1Q86YD7 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.66□□□□□ -0.38
FAM90A1Q86YD7 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.66□□□□□ -0.38
FAM90A1Q86YD7 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
FAM90A1Q86YD7 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FAM90A1Q86YD7 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FAM90A1Q86YD7 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FAM90A1Q86YD7 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC12.66□□□□□ -0.38
FAM90A1Q86YD7 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
FAM90A1Q86YD7 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
FAM90A1Q86YD7 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FAM90A1Q86YD7 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FAM90A1Q86YD7 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.66□□□□□ -0.38
FAM90A1Q86YD7 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FAM90A1Q86YD7 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FAM90A1Q86YD7 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FAM90A1Q86YD7 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FAM90A1Q86YD7 C2orf27AP3-201ENST00000434123 579 ntBASIC12.66□□□□□ -0.38
FAM90A1Q86YD7 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.66□□□□□ -0.38
FAM90A1Q86YD7 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FAM90A1Q86YD7 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC12.66□□□□□ -0.38
FAM90A1Q86YD7 CROCCP4-201ENST00000457096 498 ntBASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 1321.2 ms