Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 AC104596.2-201ENST00000512793 793 ntBASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 AC010327.5-201ENST00000586923 3061 ntBASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 LINC01230-201ENST00000625222 3017 ntBASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 AC190387.1-201ENST00000551683 408 ntBASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 DUX4L47-201ENST00000566374 394 ntBASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 RPSAP52-203ENST00000622976 1023 ntBASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NHLRC1Q6VVB1 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
NHLRC1Q6VVB1 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
NHLRC1Q6VVB1 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
NHLRC1Q6VVB1 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.59□□□□□ -0.23
NHLRC1Q6VVB1 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms