Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
ATPAF1Q5TC12 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 MTHFR-210ENST00000641407 2387 ntBASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 TOMM22P5-201ENST00000416399 439 ntBASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 AC074338.1-201ENST00000416825 156 ntBASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 AJ011932.1-201ENST00000621707 465 ntBASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 AL109936.8-201ENST00000641772 604 ntBASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 CR383656.2-201ENST00000548656 2254 ntBASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
ATPAF1Q5TC12 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 MRPS18AP1-201ENST00000414458 589 ntBASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 SLED1-202ENST00000512051 380 ntBASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 AL355385.1-201ENST00000606123 409 ntBASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 AL096865.1-201ENST00000606796 927 ntBASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 AC126335.2-201ENST00000623362 4637 ntBASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
ATPAF1Q5TC12 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms