Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC10.82□□□□□ -0.68
UBE2D3P61077 RAB34-223ENST00000636154 730 ntTSL 2 BASIC10.82□□□□□ -0.68
UBE2D3P61077 AL109936.8-201ENST00000641772 604 ntBASIC10.82□□□□□ -0.68
UBE2D3P61077 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D3P61077 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D3P61077 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D3P61077 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
UBE2D3P61077 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D3P61077 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
UBE2D3P61077 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D3P61077 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
UBE2D3P61077 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D3P61077 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D3P61077 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
UBE2D3P61077 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
UBE2D3P61077 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC10.82□□□□□ -0.68
UBE2D3P61077 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
UBE2D3P61077 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC10.82□□□□□ -0.68
UBE2D3P61077 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D3P61077 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D3P61077 TP73-209ENST00000603362 1668 ntTSL 5 BASIC10.82□□□□□ -0.68
UBE2D3P61077 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D3P61077 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
UBE2D3P61077 TUBB3P1-201ENST00000405796 1332 ntBASIC10.82□□□□□ -0.68
UBE2D3P61077 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC10.82□□□□□ -0.68
UBE2D3P61077 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D3P61077 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC10.82□□□□□ -0.68
UBE2D3P61077 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D3P61077 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC10.81□□□□□ -0.68
UBE2D3P61077 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC10.81□□□□□ -0.68
UBE2D3P61077 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC10.81□□□□□ -0.68
UBE2D3P61077 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
UBE2D3P61077 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
UBE2D3P61077 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC10.81□□□□□ -0.68
UBE2D3P61077 AC067750.1-201ENST00000608826 6545 ntBASIC10.81□□□□□ -0.68
UBE2D3P61077 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 Z82170.1-201ENST00000625081 3192 ntBASIC10.81□□□□□ -0.68
UBE2D3P61077 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
UBE2D3P61077 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
UBE2D3P61077 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC10.81□□□□□ -0.68
UBE2D3P61077 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC10.81□□□□□ -0.68
UBE2D3P61077 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC10.81□□□□□ -0.68
UBE2D3P61077 TSEN15P1-201ENST00000423257 515 ntBASIC10.81□□□□□ -0.68
UBE2D3P61077 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC10.81□□□□□ -0.68
UBE2D3P61077 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC10.81□□□□□ -0.68
UBE2D3P61077 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC10.81□□□□□ -0.68
UBE2D3P61077 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC10.81□□□□□ -0.68
UBE2D3P61077 AC125807.1-201ENST00000483097 614 ntBASIC10.81□□□□□ -0.68
UBE2D3P61077 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 LY6E-204ENST00000519546 971 ntTSL 2 BASIC10.81□□□□□ -0.68
UBE2D3P61077 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC10.81□□□□□ -0.68
UBE2D3P61077 AC069120.2-201ENST00000524091 540 ntBASIC10.81□□□□□ -0.68
UBE2D3P61077 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
UBE2D3P61077 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
UBE2D3P61077 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC10.81□□□□□ -0.68
UBE2D3P61077 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC10.81□□□□□ -0.68
UBE2D3P61077 GPR39-203ENST00000622084 900 ntTSL 5 BASIC10.81□□□□□ -0.68
UBE2D3P61077 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
UBE2D3P61077 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
UBE2D3P61077 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
UBE2D3P61077 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
UBE2D3P61077 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC10.81□□□□□ -0.68
UBE2D3P61077 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D3P61077 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms