Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
SRP9P49458 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SRP9P49458 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SRP9P49458 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SRP9P49458 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SRP9P49458 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.48□□□□□ -0.25
SRP9P49458 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.48□□□□□ -0.25
SRP9P49458 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.48□□□□□ -0.25
SRP9P49458 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SRP9P49458 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SRP9P49458 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
SRP9P49458 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
SRP9P49458 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SRP9P49458 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.48□□□□□ -0.25
SRP9P49458 HIST3H2BA-201ENST00000436555 524 ntBASIC13.48□□□□□ -0.25
SRP9P49458 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.48□□□□□ -0.25
SRP9P49458 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.48□□□□□ -0.25
SRP9P49458 ZNF890P-202ENST00000530367 1156 ntBASIC13.48□□□□□ -0.25
SRP9P49458 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.48□□□□□ -0.25
SRP9P49458 AC010336.2-201ENST00000564226 506 ntBASIC13.48□□□□□ -0.25
SRP9P49458 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.48□□□□□ -0.25
SRP9P49458 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SRP9P49458 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SRP9P49458 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SRP9P49458 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SRP9P49458 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SRP9P49458 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.48□□□□□ -0.25
SRP9P49458 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SRP9P49458 AC099521.3-201ENST00000624251 2938 ntBASIC13.48□□□□□ -0.25
SRP9P49458 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SRP9P49458 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.48□□□□□ -0.25
SRP9P49458 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.48□□□□□ -0.25
SRP9P49458 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SRP9P49458 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SRP9P49458 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SRP9P49458 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SRP9P49458 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.47□□□□□ -0.25
SRP9P49458 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.47□□□□□ -0.25
SRP9P49458 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SRP9P49458 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.47□□□□□ -0.25
SRP9P49458 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SRP9P49458 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.47□□□□□ -0.25
SRP9P49458 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SRP9P49458 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.47□□□□□ -0.25
SRP9P49458 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.47□□□□□ -0.25
SRP9P49458 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
SRP9P49458 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.47□□□□□ -0.25
SRP9P49458 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SRP9P49458 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SRP9P49458 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.47□□□□□ -0.25
SRP9P49458 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SRP9P49458 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SRP9P49458 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SRP9P49458 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SRP9P49458 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
SRP9P49458 AC022144.1-201ENST00000602255 1580 ntBASIC13.47□□□□□ -0.25
SRP9P49458 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SRP9P49458 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SRP9P49458 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SRP9P49458 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
SRP9P49458 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SRP9P49458 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.47□□□□□ -0.25
SRP9P49458 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.47□□□□□ -0.25
SRP9P49458 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.47□□□□□ -0.25
SRP9P49458 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.47□□□□□ -0.25
SRP9P49458 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
SRP9P49458 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.47□□□□□ -0.25
SRP9P49458 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.47□□□□□ -0.25
SRP9P49458 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.47□□□□□ -0.25
SRP9P49458 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SRP9P49458 AL512361.1-201ENST00000554200 418 ntBASIC13.47□□□□□ -0.25
SRP9P49458 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
SRP9P49458 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.47□□□□□ -0.25
SRP9P49458 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.47□□□□□ -0.25
SRP9P49458 AL390955.2-201ENST00000603032 514 ntBASIC13.47□□□□□ -0.25
SRP9P49458 AL355385.1-201ENST00000606123 409 ntBASIC13.47□□□□□ -0.25
SRP9P49458 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SRP9P49458 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SRP9P49458 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.47□□□□□ -0.25
SRP9P49458 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.47□□□□□ -0.25
SRP9P49458 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SRP9P49458 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SRP9P49458 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
SRP9P49458 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
SRP9P49458 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.47□□□□□ -0.25
SRP9P49458 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
SRP9P49458 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SRP9P49458 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SRP9P49458 BTBD7P1-201ENST00000447253 1453 ntBASIC13.47□□□□□ -0.25
SRP9P49458 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.47□□□□□ -0.25
SRP9P49458 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SRP9P49458 AC018529.2-202ENST00000611482 3087 ntBASIC13.47□□□□□ -0.25
SRP9P49458 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SRP9P49458 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.47□□□□□ -0.25
SRP9P49458 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SRP9P49458 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
SRP9P49458 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
SRP9P49458 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SRP9P49458 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SRP9P49458 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms