Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
CSNK1A1P48729 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
CSNK1A1P48729 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1A1P48729 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1A1P48729 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1A1P48729 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1A1P48729 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
CSNK1A1P48729 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CSNK1A1P48729 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CSNK1A1P48729 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1A1P48729 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1A1P48729 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1A1P48729 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1A1P48729 KLF2P2-201ENST00000416807 1039 ntBASIC13.47□□□□□ -0.25
CSNK1A1P48729 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.47□□□□□ -0.25
CSNK1A1P48729 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.47□□□□□ -0.25
CSNK1A1P48729 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
CSNK1A1P48729 AC022616.1-201ENST00000518688 554 ntBASIC13.47□□□□□ -0.25
CSNK1A1P48729 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.47□□□□□ -0.25
CSNK1A1P48729 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.47□□□□□ -0.25
CSNK1A1P48729 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.47□□□□□ -0.25
CSNK1A1P48729 AC009486.1-201ENST00000569860 813 ntBASIC13.47□□□□□ -0.25
CSNK1A1P48729 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.47□□□□□ -0.25
CSNK1A1P48729 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.47□□□□□ -0.25
CSNK1A1P48729 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.47□□□□□ -0.25
CSNK1A1P48729 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.47□□□□□ -0.25
CSNK1A1P48729 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1A1P48729 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1A1P48729 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1A1P48729 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.47□□□□□ -0.25
CSNK1A1P48729 LRRC59-203ENST00000576448 1531 ntBASIC13.47□□□□□ -0.25
CSNK1A1P48729 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1A1P48729 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1A1P48729 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CSNK1A1P48729 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1A1P48729 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CSNK1A1P48729 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1A1P48729 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CSNK1A1P48729 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1A1P48729 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1A1P48729 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1A1P48729 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1A1P48729 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CSNK1A1P48729 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1A1P48729 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSNK1A1P48729 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.46□□□□□ -0.25
CSNK1A1P48729 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSNK1A1P48729 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSNK1A1P48729 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSNK1A1P48729 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSNK1A1P48729 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CSNK1A1P48729 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSNK1A1P48729 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSNK1A1P48729 CICP23-201ENST00000605013 2741 ntBASIC13.46□□□□□ -0.25
CSNK1A1P48729 CICP24-201ENST00000605464 2705 ntBASIC13.46□□□□□ -0.25
CSNK1A1P48729 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.46□□□□□ -0.25
CSNK1A1P48729 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSNK1A1P48729 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSNK1A1P48729 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSNK1A1P48729 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSNK1A1P48729 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSNK1A1P48729 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSNK1A1P48729 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSNK1A1P48729 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CSNK1A1P48729 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CSNK1A1P48729 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.46□□□□□ -0.25
CSNK1A1P48729 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CSNK1A1P48729 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CSNK1A1P48729 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CSNK1A1P48729 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSNK1A1P48729 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.46□□□□□ -0.25
CSNK1A1P48729 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CSNK1A1P48729 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CSNK1A1P48729 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.46□□□□□ -0.25
CSNK1A1P48729 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.46□□□□□ -0.25
CSNK1A1P48729 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.46□□□□□ -0.25
CSNK1A1P48729 CLUHP6-201ENST00000580789 941 ntBASIC13.46□□□□□ -0.25
CSNK1A1P48729 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.46□□□□□ -0.25
CSNK1A1P48729 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.46□□□□□ -0.25
CSNK1A1P48729 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.46□□□□□ -0.25
CSNK1A1P48729 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.46□□□□□ -0.25
CSNK1A1P48729 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.46□□□□□ -0.25
CSNK1A1P48729 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CSNK1A1P48729 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.46□□□□□ -0.25
CSNK1A1P48729 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CSNK1A1P48729 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSNK1A1P48729 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CSNK1A1P48729 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CSNK1A1P48729 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CSNK1A1P48729 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.46□□□□□ -0.26
CSNK1A1P48729 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CSNK1A1P48729 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CSNK1A1P48729 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.46□□□□□ -0.26
CSNK1A1P48729 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.46□□□□□ -0.26
CSNK1A1P48729 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CSNK1A1P48729 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
CSNK1A1P48729 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CSNK1A1P48729 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CSNK1A1P48729 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CSNK1A1P48729 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms