Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.16■□□□□ 0.18
HOXC8P31273 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HOXC8P31273 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HOXC8P31273 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HOXC8P31273 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.16■□□□□ 0.18
HOXC8P31273 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
HOXC8P31273 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.16■□□□□ 0.18
HOXC8P31273 CICP23-201ENST00000605013 2741 ntBASIC16.16■□□□□ 0.18
HOXC8P31273 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HOXC8P31273 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.16■□□□□ 0.18
HOXC8P31273 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HOXC8P31273 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC16.16■□□□□ 0.18
HOXC8P31273 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.16■□□□□ 0.18
HOXC8P31273 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.16■□□□□ 0.18
HOXC8P31273 KHSRPP1-201ENST00000427983 1768 ntBASIC16.15■□□□□ 0.18
HOXC8P31273 AC138035.3-201ENST00000622706 2791 ntBASIC16.15■□□□□ 0.18
HOXC8P31273 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.15■□□□□ 0.18
HOXC8P31273 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HOXC8P31273 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HOXC8P31273 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HOXC8P31273 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HOXC8P31273 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HOXC8P31273 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HOXC8P31273 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HOXC8P31273 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HOXC8P31273 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HOXC8P31273 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HOXC8P31273 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HOXC8P31273 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HOXC8P31273 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.15■□□□□ 0.18
HOXC8P31273 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HOXC8P31273 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HOXC8P31273 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HOXC8P31273 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HOXC8P31273 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HOXC8P31273 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HOXC8P31273 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HOXC8P31273 BANF1P3-201ENST00000412556 261 ntBASIC16.15■□□□□ 0.18
HOXC8P31273 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HOXC8P31273 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HOXC8P31273 ST13P19-201ENST00000442505 1124 ntBASIC16.15■□□□□ 0.18
HOXC8P31273 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HOXC8P31273 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC16.15■□□□□ 0.18
HOXC8P31273 PGAM1P5-201ENST00000548011 764 ntBASIC16.15■□□□□ 0.18
HOXC8P31273 FOS-204ENST00000554617 796 ntTSL 2 BASIC16.15■□□□□ 0.18
HOXC8P31273 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.15■□□□□ 0.18
HOXC8P31273 AC087045.2-201ENST00000606279 1003 ntBASIC16.15■□□□□ 0.18
HOXC8P31273 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HOXC8P31273 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC16.15■□□□□ 0.18
HOXC8P31273 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
HOXC8P31273 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.15■□□□□ 0.18
HOXC8P31273 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HOXC8P31273 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HOXC8P31273 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC16.15■□□□□ 0.18
HOXC8P31273 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HOXC8P31273 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
HOXC8P31273 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HOXC8P31273 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HOXC8P31273 AL109954.1-202ENST00000564051 2148 ntBASIC16.15■□□□□ 0.18
HOXC8P31273 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
HOXC8P31273 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.14■□□□□ 0.18
HOXC8P31273 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
HOXC8P31273 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.14■□□□□ 0.17
HOXC8P31273 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
HOXC8P31273 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HOXC8P31273 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HOXC8P31273 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HOXC8P31273 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.14■□□□□ 0.17
HOXC8P31273 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HOXC8P31273 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
HOXC8P31273 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
HOXC8P31273 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HOXC8P31273 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HOXC8P31273 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HOXC8P31273 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.14■□□□□ 0.17
HOXC8P31273 RNA5SP359-201ENST00000364838 113 ntBASIC16.14■□□□□ 0.17
HOXC8P31273 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC16.14■□□□□ 0.17
HOXC8P31273 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC16.14■□□□□ 0.17
HOXC8P31273 RPL8P2-201ENST00000430538 502 ntBASIC16.14■□□□□ 0.17
HOXC8P31273 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.14■□□□□ 0.17
HOXC8P31273 AC078991.1-201ENST00000437297 610 ntBASIC16.14■□□□□ 0.17
HOXC8P31273 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
HOXC8P31273 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC16.14■□□□□ 0.17
HOXC8P31273 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HOXC8P31273 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HOXC8P31273 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC16.14■□□□□ 0.17
HOXC8P31273 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.14■□□□□ 0.17
HOXC8P31273 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HOXC8P31273 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
HOXC8P31273 DNM1P30-201ENST00000563586 452 ntBASIC16.14■□□□□ 0.17
HOXC8P31273 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.14■□□□□ 0.17
HOXC8P31273 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HOXC8P31273 MIR6842-201ENST00000612539 65 ntBASIC16.14■□□□□ 0.17
HOXC8P31273 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
HOXC8P31273 AC242376.2-201ENST00000619355 883 ntBASIC16.14■□□□□ 0.17
HOXC8P31273 AC009560.1-201ENST00000620208 434 ntBASIC16.14■□□□□ 0.17
HOXC8P31273 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC16.14■□□□□ 0.17
HOXC8P31273 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HOXC8P31273 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HOXC8P31273 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms