Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.74□□□□□ -0.05
EPHA3P29320 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.74□□□□□ -0.05
EPHA3P29320 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.74□□□□□ -0.05
EPHA3P29320 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.74□□□□□ -0.05
EPHA3P29320 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.74□□□□□ -0.05
EPHA3P29320 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.74□□□□□ -0.05
EPHA3P29320 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
EPHA3P29320 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA3P29320 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.74□□□□□ -0.05
EPHA3P29320 AC009093.7-201ENST00000623853 1223 ntBASIC14.74□□□□□ -0.05
EPHA3P29320 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
EPHA3P29320 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA3P29320 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
EPHA3P29320 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA3P29320 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA3P29320 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
EPHA3P29320 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.74□□□□□ -0.05
EPHA3P29320 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.74□□□□□ -0.05
EPHA3P29320 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA3P29320 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
EPHA3P29320 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA3P29320 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
EPHA3P29320 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
EPHA3P29320 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
EPHA3P29320 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
EPHA3P29320 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.73□□□□□ -0.05
EPHA3P29320 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.73□□□□□ -0.05
EPHA3P29320 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.73□□□□□ -0.05
EPHA3P29320 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
EPHA3P29320 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
EPHA3P29320 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.73□□□□□ -0.05
EPHA3P29320 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
EPHA3P29320 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
EPHA3P29320 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.73□□□□□ -0.05
EPHA3P29320 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.73□□□□□ -0.05
EPHA3P29320 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
EPHA3P29320 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
EPHA3P29320 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
EPHA3P29320 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
EPHA3P29320 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
EPHA3P29320 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
EPHA3P29320 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
EPHA3P29320 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.73□□□□□ -0.05
EPHA3P29320 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
EPHA3P29320 MIR574-201ENST00000385209 96 ntBASIC14.73□□□□□ -0.05
EPHA3P29320 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.73□□□□□ -0.05
EPHA3P29320 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.73□□□□□ -0.05
EPHA3P29320 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
EPHA3P29320 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
EPHA3P29320 AC022447.6-201ENST00000515522 438 ntBASIC14.73□□□□□ -0.05
EPHA3P29320 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.73□□□□□ -0.05
EPHA3P29320 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.73□□□□□ -0.05
EPHA3P29320 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.73□□□□□ -0.05
EPHA3P29320 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
EPHA3P29320 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.73□□□□□ -0.05
EPHA3P29320 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.73□□□□□ -0.05
EPHA3P29320 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.73□□□□□ -0.05
EPHA3P29320 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.73□□□□□ -0.05
EPHA3P29320 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.73□□□□□ -0.05
EPHA3P29320 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
EPHA3P29320 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
EPHA3P29320 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
EPHA3P29320 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.73□□□□□ -0.05
EPHA3P29320 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
EPHA3P29320 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
EPHA3P29320 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
EPHA3P29320 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
EPHA3P29320 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.73□□□□□ -0.05
EPHA3P29320 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
EPHA3P29320 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
EPHA3P29320 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
EPHA3P29320 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
EPHA3P29320 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.72□□□□□ -0.05
EPHA3P29320 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
EPHA3P29320 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
EPHA3P29320 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
EPHA3P29320 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
EPHA3P29320 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
EPHA3P29320 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
EPHA3P29320 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
EPHA3P29320 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
EPHA3P29320 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.72□□□□□ -0.05
EPHA3P29320 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
EPHA3P29320 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
EPHA3P29320 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
EPHA3P29320 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.72□□□□□ -0.05
EPHA3P29320 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
EPHA3P29320 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.72□□□□□ -0.05
EPHA3P29320 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
EPHA3P29320 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
EPHA3P29320 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
EPHA3P29320 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
EPHA3P29320 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
EPHA3P29320 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
EPHA3P29320 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
EPHA3P29320 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.72□□□□□ -0.05
EPHA3P29320 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.72□□□□□ -0.05
EPHA3P29320 YBX1P5-201ENST00000509441 847 ntBASIC14.72□□□□□ -0.05
EPHA3P29320 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.72□□□□□ -0.05
EPHA3P29320 AL512361.1-201ENST00000554200 418 ntBASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms