Protein–RNA interactions for Protein: P28329

CHAT, Choline O-acetyltransferase, humanhuman

Predictions only

Length 748 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHATP28329 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CHATP28329 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CHATP28329 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CHATP28329 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CHATP28329 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CHATP28329 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CHATP28329 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CHATP28329 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.95□□□□□ -0.34
CHATP28329 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.95□□□□□ -0.34
CHATP28329 AC010327.5-201ENST00000586923 3061 ntBASIC12.94□□□□□ -0.34
CHATP28329 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHATP28329 LILRP1-201ENST00000444199 1370 ntBASIC12.94□□□□□ -0.34
CHATP28329 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.94□□□□□ -0.34
CHATP28329 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.94□□□□□ -0.34
CHATP28329 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHATP28329 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHATP28329 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHATP28329 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHATP28329 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHATP28329 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.94□□□□□ -0.34
CHATP28329 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.94□□□□□ -0.34
CHATP28329 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CHATP28329 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.94□□□□□ -0.34
CHATP28329 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CHATP28329 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.94□□□□□ -0.34
CHATP28329 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.94□□□□□ -0.34
CHATP28329 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CHATP28329 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12.94□□□□□ -0.34
CHATP28329 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHATP28329 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHATP28329 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CHATP28329 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CHATP28329 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHATP28329 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC12.94□□□□□ -0.34
CHATP28329 METTL21AP1-201ENST00000438852 635 ntBASIC12.94□□□□□ -0.34
CHATP28329 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CHATP28329 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC12.94□□□□□ -0.34
CHATP28329 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.94□□□□□ -0.34
CHATP28329 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.94□□□□□ -0.34
CHATP28329 RN7SL618P-201ENST00000477850 296 ntBASIC12.94□□□□□ -0.34
CHATP28329 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.94□□□□□ -0.34
CHATP28329 AC069262.1-201ENST00000539058 672 ntBASIC12.94□□□□□ -0.34
CHATP28329 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.94□□□□□ -0.34
CHATP28329 AC010336.2-201ENST00000564226 506 ntBASIC12.94□□□□□ -0.34
CHATP28329 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.94□□□□□ -0.34
CHATP28329 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC12.94□□□□□ -0.34
CHATP28329 METTL23-205ENST00000588302 925 ntTSL 5 BASIC12.94□□□□□ -0.34
CHATP28329 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.94□□□□□ -0.34
CHATP28329 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CHATP28329 TEX28P1-201ENST00000613479 1221 ntBASIC12.94□□□□□ -0.34
CHATP28329 TEX28P2-201ENST00000617764 1221 ntBASIC12.94□□□□□ -0.34
CHATP28329 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHATP28329 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.94□□□□□ -0.34
CHATP28329 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHATP28329 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.94□□□□□ -0.34
CHATP28329 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHATP28329 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHATP28329 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
CHATP28329 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CHATP28329 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHATP28329 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CHATP28329 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CHATP28329 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.94□□□□□ -0.34
CHATP28329 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CHATP28329 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHATP28329 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.94□□□□□ -0.34
CHATP28329 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHATP28329 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CHATP28329 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.94□□□□□ -0.34
CHATP28329 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CHATP28329 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHATP28329 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.94□□□□□ -0.34
CHATP28329 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CHATP28329 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.93□□□□□ -0.34
CHATP28329 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CHATP28329 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CHATP28329 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CHATP28329 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CHATP28329 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CHATP28329 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CHATP28329 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CHATP28329 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.93□□□□□ -0.34
CHATP28329 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CHATP28329 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CHATP28329 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CHATP28329 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CHATP28329 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CHATP28329 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
CHATP28329 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CHATP28329 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CHATP28329 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
CHATP28329 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CHATP28329 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CHATP28329 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CHATP28329 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CHATP28329 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CHATP28329 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
CHATP28329 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CHATP28329 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC12.93□□□□□ -0.34
CHATP28329 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms