Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.16□□□□□ -0.14
TRIM3O75382 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.16□□□□□ -0.14
TRIM3O75382 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.16□□□□□ -0.14
TRIM3O75382 TTTY23B-201ENST00000442790 549 ntBASIC14.16□□□□□ -0.14
TRIM3O75382 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.16□□□□□ -0.14
TRIM3O75382 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.16□□□□□ -0.14
TRIM3O75382 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.16□□□□□ -0.14
TRIM3O75382 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.16□□□□□ -0.14
TRIM3O75382 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.16□□□□□ -0.14
TRIM3O75382 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.16□□□□□ -0.14
TRIM3O75382 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.16□□□□□ -0.14
TRIM3O75382 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.16□□□□□ -0.14
TRIM3O75382 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM3O75382 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM3O75382 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM3O75382 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM3O75382 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM3O75382 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.16□□□□□ -0.14
TRIM3O75382 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM3O75382 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TRIM3O75382 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.16□□□□□ -0.14
TRIM3O75382 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRIM3O75382 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM3O75382 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
TRIM3O75382 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM3O75382 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM3O75382 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM3O75382 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM3O75382 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM3O75382 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.15□□□□□ -0.14
TRIM3O75382 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM3O75382 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM3O75382 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM3O75382 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM3O75382 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.15□□□□□ -0.14
TRIM3O75382 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM3O75382 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM3O75382 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TRIM3O75382 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TRIM3O75382 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM3O75382 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM3O75382 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM3O75382 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
TRIM3O75382 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM3O75382 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TRIM3O75382 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
TRIM3O75382 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM3O75382 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM3O75382 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.15□□□□□ -0.14
TRIM3O75382 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.15□□□□□ -0.14
TRIM3O75382 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.15□□□□□ -0.14
TRIM3O75382 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.15□□□□□ -0.14
TRIM3O75382 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM3O75382 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.15□□□□□ -0.14
TRIM3O75382 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
TRIM3O75382 AC010319.3-201ENST00000597028 470 ntBASIC14.15□□□□□ -0.14
TRIM3O75382 AC093813.1-201ENST00000605066 256 ntBASIC14.15□□□□□ -0.14
TRIM3O75382 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRIM3O75382 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM3O75382 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM3O75382 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.15□□□□□ -0.14
TRIM3O75382 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.15□□□□□ -0.14
TRIM3O75382 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM3O75382 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM3O75382 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.15□□□□□ -0.14
TRIM3O75382 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM3O75382 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TRIM3O75382 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
TRIM3O75382 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.15□□□□□ -0.14
TRIM3O75382 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRIM3O75382 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM3O75382 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.15□□□□□ -0.14
TRIM3O75382 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM3O75382 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM3O75382 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.15□□□□□ -0.14
TRIM3O75382 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM3O75382 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRIM3O75382 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.15□□□□□ -0.14
TRIM3O75382 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
TRIM3O75382 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
TRIM3O75382 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
TRIM3O75382 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.15
TRIM3O75382 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM3O75382 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM3O75382 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM3O75382 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
TRIM3O75382 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM3O75382 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM3O75382 MROH4P-201ENST00000431302 1578 ntBASIC14.14□□□□□ -0.15
TRIM3O75382 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.14□□□□□ -0.15
TRIM3O75382 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TRIM3O75382 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM3O75382 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM3O75382 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM3O75382 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TRIM3O75382 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM3O75382 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM3O75382 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM3O75382 AC005840.4-201ENST00000541242 2494 ntBASIC14.14□□□□□ -0.15
TRIM3O75382 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms