Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF13O43567 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF13O43567 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF13O43567 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF13O43567 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.81□□□□□ -0.2
RNF13O43567 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.81□□□□□ -0.2
RNF13O43567 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
RNF13O43567 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
RNF13O43567 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.81□□□□□ -0.2
RNF13O43567 RFPL4AP1-201ENST00000530883 850 ntBASIC13.81□□□□□ -0.2
RNF13O43567 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.81□□□□□ -0.2
RNF13O43567 TPRX2P-201ENST00000535362 881 ntBASIC13.81□□□□□ -0.2
RNF13O43567 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.81□□□□□ -0.2
RNF13O43567 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.81□□□□□ -0.2
RNF13O43567 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF13O43567 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RNF13O43567 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF13O43567 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
RNF13O43567 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
RNF13O43567 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF13O43567 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
RNF13O43567 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RNF13O43567 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF13O43567 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF13O43567 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.81□□□□□ -0.2
RNF13O43567 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF13O43567 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF13O43567 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF13O43567 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF13O43567 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF13O43567 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF13O43567 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RNF13O43567 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
RNF13O43567 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF13O43567 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF13O43567 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.81□□□□□ -0.2
RNF13O43567 AC027601.5-201ENST00000624065 2482 ntBASIC13.81□□□□□ -0.2
RNF13O43567 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF13O43567 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF13O43567 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF13O43567 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.81□□□□□ -0.2
RNF13O43567 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF13O43567 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF13O43567 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF13O43567 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF13O43567 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF13O43567 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF13O43567 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF13O43567 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
RNF13O43567 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF13O43567 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.8□□□□□ -0.2
RNF13O43567 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF13O43567 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF13O43567 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF13O43567 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RNF13O43567 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF13O43567 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF13O43567 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF13O43567 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF13O43567 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF13O43567 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF13O43567 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.8□□□□□ -0.2
RNF13O43567 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.8□□□□□ -0.2
RNF13O43567 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF13O43567 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF13O43567 AC004066.1-201ENST00000502488 802 ntBASIC13.8□□□□□ -0.2
RNF13O43567 DOC2GP-202ENST00000514950 1163 ntBASIC13.8□□□□□ -0.2
RNF13O43567 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF13O43567 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.8□□□□□ -0.2
RNF13O43567 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF13O43567 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.8□□□□□ -0.2
RNF13O43567 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
RNF13O43567 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF13O43567 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF13O43567 SAMD11P1-201ENST00000571429 661 ntBASIC13.8□□□□□ -0.2
RNF13O43567 AC005498.2-205ENST00000593218 784 ntBASIC13.8□□□□□ -0.2
RNF13O43567 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF13O43567 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.8□□□□□ -0.2
RNF13O43567 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
RNF13O43567 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF13O43567 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF13O43567 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
RNF13O43567 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF13O43567 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF13O43567 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF13O43567 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF13O43567 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF13O43567 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF13O43567 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF13O43567 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF13O43567 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
RNF13O43567 MTHFR-210ENST00000641407 2387 ntBASIC13.8□□□□□ -0.2
RNF13O43567 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
RNF13O43567 HSPA7-201ENST00000445535 1927 ntBASIC13.8□□□□□ -0.2
RNF13O43567 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.8□□□□□ -0.2
RNF13O43567 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF13O43567 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF13O43567 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.8□□□□□ -0.2
RNF13O43567 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF13O43567 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms