Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
RIPK2O43353 HLA-K-203ENST00000430151 1046 ntBASIC15.35■□□□□ 0.05
RIPK2O43353 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
RIPK2O43353 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.35■□□□□ 0.05
RIPK2O43353 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.35■□□□□ 0.05
RIPK2O43353 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RIPK2O43353 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.35■□□□□ 0.05
RIPK2O43353 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.35■□□□□ 0.05
RIPK2O43353 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.35■□□□□ 0.05
RIPK2O43353 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.35■□□□□ 0.05
RIPK2O43353 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RIPK2O43353 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RIPK2O43353 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.35■□□□□ 0.05
RIPK2O43353 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RIPK2O43353 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RIPK2O43353 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RIPK2O43353 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RIPK2O43353 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
RIPK2O43353 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RIPK2O43353 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RIPK2O43353 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.35■□□□□ 0.05
RIPK2O43353 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.34■□□□□ 0.05
RIPK2O43353 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.34■□□□□ 0.05
RIPK2O43353 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RIPK2O43353 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC15.34■□□□□ 0.05
RIPK2O43353 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RIPK2O43353 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RIPK2O43353 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RIPK2O43353 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RIPK2O43353 PPT1-213ENST00000641319 2388 ntBASIC15.34■□□□□ 0.05
RIPK2O43353 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RIPK2O43353 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RIPK2O43353 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RIPK2O43353 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RIPK2O43353 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.34■□□□□ 0.05
RIPK2O43353 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
RIPK2O43353 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.34■□□□□ 0.05
RIPK2O43353 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RIPK2O43353 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.34■□□□□ 0.05
RIPK2O43353 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RIPK2O43353 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RIPK2O43353 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.34■□□□□ 0.05
RIPK2O43353 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RIPK2O43353 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RIPK2O43353 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
RIPK2O43353 AC004461.1-201ENST00000412461 403 ntBASIC15.34■□□□□ 0.05
RIPK2O43353 RPL37AP1-201ENST00000412502 279 ntBASIC15.34■□□□□ 0.05
RIPK2O43353 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.34■□□□□ 0.05
RIPK2O43353 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RIPK2O43353 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.34■□□□□ 0.05
RIPK2O43353 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
RIPK2O43353 CEND1P1-201ENST00000451006 455 ntBASIC15.34■□□□□ 0.05
RIPK2O43353 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.34■□□□□ 0.05
RIPK2O43353 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.34■□□□□ 0.05
RIPK2O43353 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RIPK2O43353 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.34■□□□□ 0.05
RIPK2O43353 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RIPK2O43353 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RIPK2O43353 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.34■□□□□ 0.05
RIPK2O43353 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.34■□□□□ 0.05
RIPK2O43353 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.34■□□□□ 0.05
RIPK2O43353 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.34■□□□□ 0.05
RIPK2O43353 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.34■□□□□ 0.05
RIPK2O43353 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RIPK2O43353 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RIPK2O43353 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
RIPK2O43353 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RIPK2O43353 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC15.34■□□□□ 0.05
RIPK2O43353 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RIPK2O43353 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RIPK2O43353 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RIPK2O43353 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RIPK2O43353 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RIPK2O43353 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RIPK2O43353 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
RIPK2O43353 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RIPK2O43353 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.34■□□□□ 0.05
RIPK2O43353 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
RIPK2O43353 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RIPK2O43353 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RIPK2O43353 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.34■□□□□ 0.05
RIPK2O43353 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RIPK2O43353 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC15.34■□□□□ 0.05
RIPK2O43353 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RIPK2O43353 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RIPK2O43353 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RIPK2O43353 AC020910.6-201ENST00000623084 1459 ntBASIC15.33■□□□□ 0.05
RIPK2O43353 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
RIPK2O43353 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.33■□□□□ 0.05
RIPK2O43353 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC15.33■□□□□ 0.05
RIPK2O43353 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RIPK2O43353 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RIPK2O43353 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RIPK2O43353 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RIPK2O43353 DGCR9-201ENST00000609630 2415 ntBASIC15.33■□□□□ 0.04
RIPK2O43353 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RIPK2O43353 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RIPK2O43353 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RIPK2O43353 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.33■□□□□ 0.04
RIPK2O43353 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms