Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC10.89□□□□□ -0.67
PAX4O43316 AC126365.1-201ENST00000578585 1514 ntBASIC10.89□□□□□ -0.67
PAX4O43316 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
PAX4O43316 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
PAX4O43316 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC10.89□□□□□ -0.67
PAX4O43316 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
PAX4O43316 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC10.89□□□□□ -0.67
PAX4O43316 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC10.89□□□□□ -0.67
PAX4O43316 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC10.89□□□□□ -0.67
PAX4O43316 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
PAX4O43316 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 SMIM26-201ENST00000411646 505 ntAPPRIS P5 TSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC10.89□□□□□ -0.67
PAX4O43316 DFFBP1-201ENST00000433250 979 ntBASIC10.89□□□□□ -0.67
PAX4O43316 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC10.89□□□□□ -0.67
PAX4O43316 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 RN7SL399P-201ENST00000471648 279 ntBASIC10.89□□□□□ -0.67
PAX4O43316 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC10.89□□□□□ -0.67
PAX4O43316 TERF1P3-201ENST00000505638 1227 ntBASIC10.89□□□□□ -0.67
PAX4O43316 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC10.89□□□□□ -0.67
PAX4O43316 AL109954.1-202ENST00000564051 2148 ntBASIC10.89□□□□□ -0.67
PAX4O43316 RRP7BP-205ENST00000566851 833 ntBASIC10.89□□□□□ -0.67
PAX4O43316 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC10.89□□□□□ -0.67
PAX4O43316 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
PAX4O43316 AC092364.2-202ENST00000597012 1073 ntBASIC10.89□□□□□ -0.67
PAX4O43316 AC000095.1-201ENST00000603208 874 ntBASIC10.89□□□□□ -0.67
PAX4O43316 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC10.89□□□□□ -0.67
PAX4O43316 AC022079.1-201ENST00000621546 602 ntBASIC10.89□□□□□ -0.67
PAX4O43316 GPR39-203ENST00000622084 900 ntTSL 5 BASIC10.89□□□□□ -0.67
PAX4O43316 AC008761.3-201ENST00000624803 892 ntBASIC10.89□□□□□ -0.67
PAX4O43316 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC10.89□□□□□ -0.67
PAX4O43316 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
PAX4O43316 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
PAX4O43316 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC10.89□□□□□ -0.67
PAX4O43316 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC10.89□□□□□ -0.67
PAX4O43316 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC10.89□□□□□ -0.67
PAX4O43316 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC10.89□□□□□ -0.67
PAX4O43316 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC10.89□□□□□ -0.67
PAX4O43316 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 AL391825.1-201ENST00000457671 1364 ntBASIC10.89□□□□□ -0.67
PAX4O43316 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PAX4O43316 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC10.89□□□□□ -0.67
PAX4O43316 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC10.89□□□□□ -0.67
PAX4O43316 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
PAX4O43316 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
PAX4O43316 POLL-217ENST00000628479 1953 ntTSL 5 BASIC10.88□□□□□ -0.67
PAX4O43316 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
PAX4O43316 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PAX4O43316 STRN-202ENST00000379213 2254 ntTSL 5 BASIC10.88□□□□□ -0.67
PAX4O43316 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC10.88□□□□□ -0.67
PAX4O43316 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
PAX4O43316 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC10.88□□□□□ -0.67
PAX4O43316 CLK3P2-201ENST00000427566 1453 ntBASIC10.88□□□□□ -0.67
PAX4O43316 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC10.88□□□□□ -0.67
PAX4O43316 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC10.88□□□□□ -0.67
PAX4O43316 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
PAX4O43316 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
PAX4O43316 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PAX4O43316 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PAX4O43316 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PAX4O43316 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms