Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 AP000347.1-202ENST00000435868 847 ntBASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 KRT18P58-201ENST00000527480 1120 ntBASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 AC004706.3-202ENST00000621574 984 ntBASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
LRCH1Q9Y2L9 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 AL589702.1-201ENST00000641229 1509 ntBASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 SLC25A1P1-201ENST00000528351 927 ntBASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 AP002761.4-201ENST00000565433 3361 ntBASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 AP002414.3-201ENST00000589352 1468 ntBASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.43□□□□□ -0.1
LRCH1Q9Y2L9 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms