Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
KIAA1549Q9HCM3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
KIAA1549Q9HCM3 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KIAA1549Q9HCM3 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.32□□□□□ -0.28
KIAA1549Q9HCM3 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KIAA1549Q9HCM3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KIAA1549Q9HCM3 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
KIAA1549Q9HCM3 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
KIAA1549Q9HCM3 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
KIAA1549Q9HCM3 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
KIAA1549Q9HCM3 DBET-201ENST00000630918 3363 ntBASIC13.32□□□□□ -0.28
KIAA1549Q9HCM3 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.32□□□□□ -0.28
KIAA1549Q9HCM3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KIAA1549Q9HCM3 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
KIAA1549Q9HCM3 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
KIAA1549Q9HCM3 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 RN7SKP230-201ENST00000365642 335 ntBASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 SCARNA20.5-201ENST00000516991 142 ntBASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 Z98259.2-201ENST00000641583 609 ntBASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 CHMP4BP1-201ENST00000556017 588 ntBASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 PPA1-206ENST00000625364 644 ntTSL 5 BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KIAA1549Q9HCM3 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KIAA1549Q9HCM3 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
KIAA1549Q9HCM3 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
KIAA1549Q9HCM3 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.3□□□□□ -0.28
KIAA1549Q9HCM3 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
KIAA1549Q9HCM3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
KIAA1549Q9HCM3 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KIAA1549Q9HCM3 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KIAA1549Q9HCM3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KIAA1549Q9HCM3 LINC00552-201ENST00000625151 2579 ntBASIC13.3□□□□□ -0.28
KIAA1549Q9HCM3 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.3□□□□□ -0.28
KIAA1549Q9HCM3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
KIAA1549Q9HCM3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
KIAA1549Q9HCM3 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.3□□□□□ -0.28
KIAA1549Q9HCM3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KIAA1549Q9HCM3 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.3□□□□□ -0.28
KIAA1549Q9HCM3 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
KIAA1549Q9HCM3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
KIAA1549Q9HCM3 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KIAA1549Q9HCM3 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
KIAA1549Q9HCM3 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
KIAA1549Q9HCM3 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KIAA1549Q9HCM3 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
KIAA1549Q9HCM3 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.3□□□□□ -0.28
KIAA1549Q9HCM3 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.3□□□□□ -0.28
KIAA1549Q9HCM3 TSACC-208ENST00000481479 741 ntTSL 2 BASIC13.3□□□□□ -0.28
KIAA1549Q9HCM3 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.3□□□□□ -0.28
KIAA1549Q9HCM3 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.3□□□□□ -0.28
KIAA1549Q9HCM3 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.3□□□□□ -0.28
KIAA1549Q9HCM3 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KIAA1549Q9HCM3 NDUFV2P1-201ENST00000596415 907 ntBASIC13.3□□□□□ -0.28
KIAA1549Q9HCM3 AC009955.4-201ENST00000597192 544 ntBASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms