Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 BEND3P1-201ENST00000421591 1944 ntBASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 AP000344.2-201ENST00000512987 629 ntBASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 SAMD11P1-201ENST00000571429 661 ntBASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 MIR4469-201ENST00000583919 79 ntBASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
COMMD4Q9H0A8 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 AC015802.1-201ENST00000588104 1449 ntBASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 AC004461.1-201ENST00000412461 403 ntBASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 AP000347.1-202ENST00000435868 847 ntBASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 MIR4453-201ENST00000584019 89 ntBASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
COMMD4Q9H0A8 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms