Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AMBRA1Q9C0C7 AL121723.1-201ENST00000445194 1519 ntBASIC14.2□□□□□ -0.14
AMBRA1Q9C0C7 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.2□□□□□ -0.14
AMBRA1Q9C0C7 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AMBRA1Q9C0C7 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.2□□□□□ -0.14
AMBRA1Q9C0C7 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.2□□□□□ -0.14
AMBRA1Q9C0C7 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
AMBRA1Q9C0C7 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.2□□□□□ -0.14
AMBRA1Q9C0C7 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AMBRA1Q9C0C7 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AMBRA1Q9C0C7 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 MIR943-201ENST00000401286 94 ntBASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 RPL37AP1-201ENST00000412502 279 ntBASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 AC092580.3-201ENST00000430932 139 ntBASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 SERBP1P3-201ENST00000459980 809 ntBASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 AC073592.8-201ENST00000624126 511 ntBASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 AL035252.4-201ENST00000624174 288 ntBASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 CICP8-201ENST00000455800 2813 ntBASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AMBRA1Q9C0C7 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AMBRA1Q9C0C7 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AMBRA1Q9C0C7 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
AMBRA1Q9C0C7 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
AMBRA1Q9C0C7 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AMBRA1Q9C0C7 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AMBRA1Q9C0C7 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AMBRA1Q9C0C7 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
AMBRA1Q9C0C7 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AMBRA1Q9C0C7 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.18□□□□□ -0.14
AMBRA1Q9C0C7 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.18□□□□□ -0.14
AMBRA1Q9C0C7 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
AMBRA1Q9C0C7 TOMM22P5-201ENST00000416399 439 ntBASIC14.18□□□□□ -0.14
AMBRA1Q9C0C7 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.18□□□□□ -0.14
AMBRA1Q9C0C7 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.18□□□□□ -0.14
AMBRA1Q9C0C7 TREML5P-201ENST00000421694 576 ntBASIC14.18□□□□□ -0.14
AMBRA1Q9C0C7 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.18□□□□□ -0.14
AMBRA1Q9C0C7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AMBRA1Q9C0C7 KRT18P43-201ENST00000469825 1281 ntBASIC14.18□□□□□ -0.14
AMBRA1Q9C0C7 AC097493.3-201ENST00000509725 367 ntBASIC14.18□□□□□ -0.14
AMBRA1Q9C0C7 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.18□□□□□ -0.14
AMBRA1Q9C0C7 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.18□□□□□ -0.14
AMBRA1Q9C0C7 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
AMBRA1Q9C0C7 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.18□□□□□ -0.14
AMBRA1Q9C0C7 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
AMBRA1Q9C0C7 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.18□□□□□ -0.14
AMBRA1Q9C0C7 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.18□□□□□ -0.14
AMBRA1Q9C0C7 SPDYE12P-201ENST00000618416 771 ntBASIC14.18□□□□□ -0.14
AMBRA1Q9C0C7 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AMBRA1Q9C0C7 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
AMBRA1Q9C0C7 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
AMBRA1Q9C0C7 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms