Protein–RNA interactions for Protein: Q9BQ50

TREX2, Three prime repair exonuclease 2, humanhuman

Predicted RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX2Q9BQ50 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.26□□□□□ -0.13
TREX2Q9BQ50 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TREX2Q9BQ50 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TREX2Q9BQ50 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.26□□□□□ -0.13
TREX2Q9BQ50 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.26□□□□□ -0.13
TREX2Q9BQ50 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TREX2Q9BQ50 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.26□□□□□ -0.13
TREX2Q9BQ50 RN7SL837P-201ENST00000463010 287 ntBASIC14.26□□□□□ -0.13
TREX2Q9BQ50 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.26□□□□□ -0.13
TREX2Q9BQ50 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TREX2Q9BQ50 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.26□□□□□ -0.13
TREX2Q9BQ50 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TREX2Q9BQ50 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.26□□□□□ -0.13
TREX2Q9BQ50 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TREX2Q9BQ50 SAMD11P1-201ENST00000571429 661 ntBASIC14.26□□□□□ -0.13
TREX2Q9BQ50 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.26□□□□□ -0.13
TREX2Q9BQ50 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.26□□□□□ -0.13
TREX2Q9BQ50 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.26□□□□□ -0.13
TREX2Q9BQ50 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TREX2Q9BQ50 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TREX2Q9BQ50 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TREX2Q9BQ50 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TREX2Q9BQ50 MTHFR-210ENST00000641407 2387 ntBASIC14.26□□□□□ -0.13
TREX2Q9BQ50 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TREX2Q9BQ50 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TREX2Q9BQ50 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TREX2Q9BQ50 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.26□□□□□ -0.13
TREX2Q9BQ50 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TREX2Q9BQ50 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.26□□□□□ -0.13
TREX2Q9BQ50 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TREX2Q9BQ50 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TREX2Q9BQ50 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.26□□□□□ -0.13
TREX2Q9BQ50 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.26□□□□□ -0.13
TREX2Q9BQ50 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TREX2Q9BQ50 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TREX2Q9BQ50 AC007787.1-201ENST00000588095 1583 ntBASIC14.26□□□□□ -0.13
TREX2Q9BQ50 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TREX2Q9BQ50 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 INTS4P1-203ENST00000641008 3683 ntBASIC14.25□□□□□ -0.13
TREX2Q9BQ50 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 AC119751.2-201ENST00000504529 210 ntBASIC14.25□□□□□ -0.13
TREX2Q9BQ50 SPDYE18-201ENST00000510091 1050 ntBASIC14.25□□□□□ -0.13
TREX2Q9BQ50 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 SRD5A3P1-201ENST00000603021 949 ntBASIC14.25□□□□□ -0.13
TREX2Q9BQ50 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 AC007431.3-201ENST00000623221 587 ntBASIC14.25□□□□□ -0.13
TREX2Q9BQ50 AL158212.4-201ENST00000624062 1286 ntBASIC14.25□□□□□ -0.13
TREX2Q9BQ50 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TREX2Q9BQ50 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TREX2Q9BQ50 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.24□□□□□ -0.13
TREX2Q9BQ50 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.24□□□□□ -0.13
TREX2Q9BQ50 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TREX2Q9BQ50 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TREX2Q9BQ50 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TREX2Q9BQ50 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TREX2Q9BQ50 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TREX2Q9BQ50 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TREX2Q9BQ50 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TREX2Q9BQ50 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
TREX2Q9BQ50 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.24□□□□□ -0.13
TREX2Q9BQ50 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TREX2Q9BQ50 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TREX2Q9BQ50 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms