Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC107Q8WV48 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC107Q8WV48 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.16□□□□□ -0.3
CCDC107Q8WV48 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC107Q8WV48 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC13.16□□□□□ -0.3
CCDC107Q8WV48 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CCDC107Q8WV48 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.16□□□□□ -0.3
CCDC107Q8WV48 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC107Q8WV48 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.16□□□□□ -0.3
CCDC107Q8WV48 BX842568.4-201ENST00000421222 227 ntBASIC13.16□□□□□ -0.3
CCDC107Q8WV48 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.16□□□□□ -0.3
CCDC107Q8WV48 EEF1DP4-201ENST00000446006 880 ntBASIC13.16□□□□□ -0.3
CCDC107Q8WV48 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.16□□□□□ -0.3
CCDC107Q8WV48 YBX1P5-201ENST00000509441 847 ntBASIC13.16□□□□□ -0.3
CCDC107Q8WV48 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.16□□□□□ -0.3
CCDC107Q8WV48 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.16□□□□□ -0.3
CCDC107Q8WV48 AC026150.2-201ENST00000564693 1156 ntBASIC13.16□□□□□ -0.3
CCDC107Q8WV48 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.16□□□□□ -0.3
CCDC107Q8WV48 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.16□□□□□ -0.3
CCDC107Q8WV48 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.16□□□□□ -0.3
CCDC107Q8WV48 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC107Q8WV48 AC097359.3-201ENST00000603982 1210 ntBASIC13.16□□□□□ -0.3
CCDC107Q8WV48 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CCDC107Q8WV48 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CCDC107Q8WV48 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.16□□□□□ -0.3
CCDC107Q8WV48 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC107Q8WV48 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC107Q8WV48 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CCDC107Q8WV48 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.16□□□□□ -0.3
CCDC107Q8WV48 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC107Q8WV48 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.16□□□□□ -0.3
CCDC107Q8WV48 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC107Q8WV48 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC107Q8WV48 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC107Q8WV48 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 MTHFR-210ENST00000641407 2387 ntBASIC13.15□□□□□ -0.3
CCDC107Q8WV48 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 AC092865.5-201ENST00000545435 363 ntBASIC13.15□□□□□ -0.3
CCDC107Q8WV48 BANF1P1-201ENST00000553684 263 ntBASIC13.15□□□□□ -0.3
CCDC107Q8WV48 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 MIR4453-201ENST00000584019 89 ntBASIC13.15□□□□□ -0.3
CCDC107Q8WV48 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 MIR6080-201ENST00000617359 66 ntBASIC13.15□□□□□ -0.3
CCDC107Q8WV48 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 AC107918.4-201ENST00000641966 3141 ntBASIC13.15□□□□□ -0.3
CCDC107Q8WV48 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.15□□□□□ -0.3
CCDC107Q8WV48 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
CCDC107Q8WV48 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
CCDC107Q8WV48 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms