Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD1Q8N668 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.65□□□□□ -0.38
COMMD1Q8N668 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD1Q8N668 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD1Q8N668 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD1Q8N668 AC087499.5-201ENST00000452760 1342 ntBASIC12.65□□□□□ -0.38
COMMD1Q8N668 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD1Q8N668 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD1Q8N668 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD1Q8N668 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.65□□□□□ -0.38
COMMD1Q8N668 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD1Q8N668 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD1Q8N668 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.65□□□□□ -0.38
COMMD1Q8N668 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
COMMD1Q8N668 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD1Q8N668 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC12.65□□□□□ -0.38
COMMD1Q8N668 AC100757.3-201ENST00000622361 1406 ntBASIC12.65□□□□□ -0.38
COMMD1Q8N668 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD1Q8N668 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD1Q8N668 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD1Q8N668 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.65□□□□□ -0.38
COMMD1Q8N668 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC12.65□□□□□ -0.38
COMMD1Q8N668 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.65□□□□□ -0.38
COMMD1Q8N668 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
COMMD1Q8N668 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD1Q8N668 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD1Q8N668 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD1Q8N668 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD1Q8N668 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.65□□□□□ -0.38
COMMD1Q8N668 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD1Q8N668 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD1Q8N668 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC12.65□□□□□ -0.38
COMMD1Q8N668 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.65□□□□□ -0.38
COMMD1Q8N668 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.65□□□□□ -0.38
COMMD1Q8N668 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
COMMD1Q8N668 WDR53-203ENST00000429115 683 ntTSL 2 BASIC12.65□□□□□ -0.38
COMMD1Q8N668 AC092580.3-201ENST00000430932 139 ntBASIC12.65□□□□□ -0.38
COMMD1Q8N668 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.65□□□□□ -0.38
COMMD1Q8N668 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.65□□□□□ -0.38
COMMD1Q8N668 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC12.65□□□□□ -0.38
COMMD1Q8N668 AL079307.3-201ENST00000556114 283 ntBASIC12.65□□□□□ -0.38
COMMD1Q8N668 GREM1-201ENST00000560677 623 ntTSL 4 BASIC12.65□□□□□ -0.38
COMMD1Q8N668 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
COMMD1Q8N668 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC12.65□□□□□ -0.38
COMMD1Q8N668 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC12.65□□□□□ -0.38
COMMD1Q8N668 INO80C-206ENST00000586489 594 ntTSL 3 BASIC12.65□□□□□ -0.38
COMMD1Q8N668 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.65□□□□□ -0.38
COMMD1Q8N668 AL138828.2-201ENST00000615812 383 ntBASIC12.65□□□□□ -0.38
COMMD1Q8N668 AL590560.3-201ENST00000623350 461 ntBASIC12.65□□□□□ -0.38
COMMD1Q8N668 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD1Q8N668 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.65□□□□□ -0.38
COMMD1Q8N668 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC12.65□□□□□ -0.38
COMMD1Q8N668 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.65□□□□□ -0.38
COMMD1Q8N668 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD1Q8N668 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
COMMD1Q8N668 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD1Q8N668 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD1Q8N668 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD1Q8N668 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD1Q8N668 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
COMMD1Q8N668 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD1Q8N668 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD1Q8N668 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD1Q8N668 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD1Q8N668 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD1Q8N668 WASH3P-207ENST00000560956 1394 ntBASIC12.65□□□□□ -0.38
COMMD1Q8N668 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.65□□□□□ -0.38
COMMD1Q8N668 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD1Q8N668 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
COMMD1Q8N668 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.65□□□□□ -0.38
COMMD1Q8N668 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD1Q8N668 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD1Q8N668 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COMMD1Q8N668 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.65□□□□□ -0.38
COMMD1Q8N668 INTS4P1-203ENST00000641008 3683 ntBASIC12.65□□□□□ -0.39
COMMD1Q8N668 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
COMMD1Q8N668 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.39
COMMD1Q8N668 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
COMMD1Q8N668 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.65□□□□□ -0.39
COMMD1Q8N668 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.64□□□□□ -0.39
COMMD1Q8N668 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
COMMD1Q8N668 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.64□□□□□ -0.39
COMMD1Q8N668 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
COMMD1Q8N668 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.64□□□□□ -0.39
COMMD1Q8N668 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.64□□□□□ -0.39
COMMD1Q8N668 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
COMMD1Q8N668 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.64□□□□□ -0.39
COMMD1Q8N668 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
COMMD1Q8N668 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
COMMD1Q8N668 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
COMMD1Q8N668 AC152010.1-201ENST00000415779 2006 ntBASIC12.64□□□□□ -0.39
COMMD1Q8N668 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
COMMD1Q8N668 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.64□□□□□ -0.39
COMMD1Q8N668 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COMMD1Q8N668 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COMMD1Q8N668 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
COMMD1Q8N668 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.64□□□□□ -0.39
COMMD1Q8N668 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
COMMD1Q8N668 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
COMMD1Q8N668 RELA-227ENST00000615805 2236 ntTSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms