Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 AC018665.1-201ENST00000622927 1362 ntBASIC18.07■□□□□ 0.48
RNF20Q5VTR2 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 AC023090.2-201ENST00000625182 2110 ntBASIC18.07■□□□□ 0.48
RNF20Q5VTR2 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 ACKR1-201ENST00000368121 1240 ntBASIC18.07■□□□□ 0.48
RNF20Q5VTR2 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RNF20Q5VTR2 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF20Q5VTR2 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF20Q5VTR2 MTHFR-210ENST00000641407 2387 ntBASIC18.06■□□□□ 0.48
RNF20Q5VTR2 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF20Q5VTR2 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF20Q5VTR2 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RNF20Q5VTR2 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF20Q5VTR2 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF20Q5VTR2 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF20Q5VTR2 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF20Q5VTR2 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF20Q5VTR2 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF20Q5VTR2 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF20Q5VTR2 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF20Q5VTR2 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF20Q5VTR2 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF20Q5VTR2 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.06■□□□□ 0.48
RNF20Q5VTR2 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
RNF20Q5VTR2 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.06■□□□□ 0.48
RNF20Q5VTR2 AC190387.1-201ENST00000551683 408 ntBASIC18.06■□□□□ 0.48
RNF20Q5VTR2 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.06■□□□□ 0.48
RNF20Q5VTR2 AP001063.1-201ENST00000568332 529 ntBASIC18.06■□□□□ 0.48
RNF20Q5VTR2 CTBP2P3-201ENST00000585629 1255 ntBASIC18.06■□□□□ 0.48
RNF20Q5VTR2 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
RNF20Q5VTR2 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.06■□□□□ 0.48
RNF20Q5VTR2 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.06■□□□□ 0.48
RNF20Q5VTR2 CU634019.7-201ENST00000624153 1185 ntBASIC18.06■□□□□ 0.48
RNF20Q5VTR2 AC005252.2-201ENST00000624630 1141 ntBASIC18.06■□□□□ 0.48
RNF20Q5VTR2 FP236241.2-201ENST00000624906 1185 ntBASIC18.06■□□□□ 0.48
RNF20Q5VTR2 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF20Q5VTR2 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF20Q5VTR2 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF20Q5VTR2 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC18.06■□□□□ 0.48
RNF20Q5VTR2 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RNF20Q5VTR2 COCH-203ENST00000460581 2688 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF20Q5VTR2 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF20Q5VTR2 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF20Q5VTR2 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF20Q5VTR2 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF20Q5VTR2 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RNF20Q5VTR2 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF20Q5VTR2 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF20Q5VTR2 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF20Q5VTR2 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF20Q5VTR2 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF20Q5VTR2 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RNF20Q5VTR2 TK2-221ENST00000620035 5060 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF20Q5VTR2 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF20Q5VTR2 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF20Q5VTR2 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RNF20Q5VTR2 LRRC59-203ENST00000576448 1531 ntBASIC18.05■□□□□ 0.48
RNF20Q5VTR2 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF20Q5VTR2 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF20Q5VTR2 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF20Q5VTR2 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF20Q5VTR2 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF20Q5VTR2 PGGT1BP2-201ENST00000398621 1028 ntBASIC18.05■□□□□ 0.48
RNF20Q5VTR2 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF20Q5VTR2 GIMAP3P-201ENST00000495150 836 ntBASIC18.05■□□□□ 0.48
RNF20Q5VTR2 KRT18P25-201ENST00000508931 1278 ntBASIC18.05■□□□□ 0.48
RNF20Q5VTR2 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF20Q5VTR2 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF20Q5VTR2 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF20Q5VTR2 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
RNF20Q5VTR2 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF20Q5VTR2 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms