Protein–RNA interactions for Protein: P35250

RFC2, Replication factor C subunit 2, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2P35250 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RFC2P35250 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFC2P35250 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFC2P35250 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFC2P35250 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFC2P35250 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFC2P35250 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.21■□□□□ 0.19
RFC2P35250 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.21■□□□□ 0.19
RFC2P35250 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFC2P35250 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFC2P35250 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RFC2P35250 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFC2P35250 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFC2P35250 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC16.21■□□□□ 0.19
RFC2P35250 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFC2P35250 AP000356.3-201ENST00000382243 753 ntBASIC16.21■□□□□ 0.19
RFC2P35250 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFC2P35250 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.21■□□□□ 0.19
RFC2P35250 AL157407.1-201ENST00000435784 904 ntBASIC16.21■□□□□ 0.19
RFC2P35250 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
RFC2P35250 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC16.21■□□□□ 0.19
RFC2P35250 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC16.21■□□□□ 0.19
RFC2P35250 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC16.21■□□□□ 0.19
RFC2P35250 AC079112.1-201ENST00000454972 939 ntBASIC16.21■□□□□ 0.19
RFC2P35250 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RFC2P35250 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.21■□□□□ 0.19
RFC2P35250 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.21■□□□□ 0.19
RFC2P35250 MIR3677-201ENST00000578964 60 ntBASIC16.21■□□□□ 0.19
RFC2P35250 AL109837.1-201ENST00000603272 613 ntBASIC16.21■□□□□ 0.19
RFC2P35250 BX088702.1-201ENST00000610784 235 ntBASIC16.21■□□□□ 0.19
RFC2P35250 LINC01783-202ENST00000614408 828 ntBASIC16.21■□□□□ 0.19
RFC2P35250 BX284668.2-205ENST00000619677 828 ntBASIC16.21■□□□□ 0.19
RFC2P35250 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFC2P35250 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.21■□□□□ 0.19
RFC2P35250 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RFC2P35250 AC136759.1-202ENST00000530858 2194 ntBASIC16.21■□□□□ 0.19
RFC2P35250 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFC2P35250 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFC2P35250 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.21■□□□□ 0.19
RFC2P35250 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
RFC2P35250 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RFC2P35250 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
RFC2P35250 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RFC2P35250 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
RFC2P35250 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.21■□□□□ 0.18
RFC2P35250 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.2■□□□□ 0.18
RFC2P35250 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC2P35250 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.2■□□□□ 0.18
RFC2P35250 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC2P35250 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
RFC2P35250 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC2P35250 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC2P35250 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFC2P35250 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC2P35250 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC2P35250 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFC2P35250 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC2P35250 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC2P35250 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFC2P35250 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC2P35250 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC2P35250 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC2P35250 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.2■□□□□ 0.18
RFC2P35250 PFN2-202ENST00000423691 911 ntTSL 2 BASIC16.2■□□□□ 0.18
RFC2P35250 RPL8P2-201ENST00000430538 502 ntBASIC16.2■□□□□ 0.18
RFC2P35250 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC16.2■□□□□ 0.18
RFC2P35250 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC16.2■□□□□ 0.18
RFC2P35250 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC16.2■□□□□ 0.18
RFC2P35250 AC006122.1-201ENST00000493323 440 ntBASIC16.2■□□□□ 0.18
RFC2P35250 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
RFC2P35250 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC16.2■□□□□ 0.18
RFC2P35250 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
RFC2P35250 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC16.2■□□□□ 0.18
RFC2P35250 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC16.2■□□□□ 0.18
RFC2P35250 AC005632.3-201ENST00000605544 308 ntBASIC16.2■□□□□ 0.18
RFC2P35250 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.2■□□□□ 0.18
RFC2P35250 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RFC2P35250 CAP2P1-201ENST00000557743 1390 ntBASIC16.2■□□□□ 0.18
RFC2P35250 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC2P35250 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC2P35250 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC2P35250 AC092127.1-201ENST00000567093 3455 ntBASIC16.2■□□□□ 0.18
RFC2P35250 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC2P35250 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC2P35250 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFC2P35250 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC2P35250 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC2P35250 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC2P35250 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
RFC2P35250 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC2P35250 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC2P35250 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFC2P35250 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFC2P35250 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFC2P35250 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFC2P35250 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.19■□□□□ 0.18
RFC2P35250 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFC2P35250 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFC2P35250 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RFC2P35250 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms