Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHMP24386 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHMP24386 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHMP24386 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
CHMP24386 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHMP24386 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CHMP24386 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHMP24386 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CHMP24386 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHMP24386 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHMP24386 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.2□□□□□ -0.14
CHMP24386 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.2□□□□□ -0.14
CHMP24386 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHMP24386 AP000845.1-201ENST00000581677 2131 ntBASIC14.2□□□□□ -0.14
CHMP24386 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.2□□□□□ -0.14
CHMP24386 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.2□□□□□ -0.14
CHMP24386 LINC01230-201ENST00000625222 3017 ntBASIC14.2□□□□□ -0.14
CHMP24386 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CHMP24386 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CHMP24386 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHMP24386 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.19□□□□□ -0.14
CHMP24386 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CHMP24386 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CHMP24386 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CHMP24386 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHMP24386 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHMP24386 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHMP24386 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHMP24386 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
CHMP24386 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.19□□□□□ -0.14
CHMP24386 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHMP24386 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHMP24386 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
CHMP24386 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHMP24386 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
CHMP24386 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.19□□□□□ -0.14
CHMP24386 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CHMP24386 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.19□□□□□ -0.14
CHMP24386 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.19□□□□□ -0.14
CHMP24386 RN7SL399P-201ENST00000471648 279 ntBASIC14.19□□□□□ -0.14
CHMP24386 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.19□□□□□ -0.14
CHMP24386 AC104596.2-201ENST00000512793 793 ntBASIC14.19□□□□□ -0.14
CHMP24386 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.19□□□□□ -0.14
CHMP24386 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.19□□□□□ -0.14
CHMP24386 AL596325.1-201ENST00000563991 1082 ntBASIC14.19□□□□□ -0.14
CHMP24386 CHCHD2P3-201ENST00000603038 451 ntBASIC14.19□□□□□ -0.14
CHMP24386 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.19□□□□□ -0.14
CHMP24386 AL158212.4-201ENST00000624062 1286 ntBASIC14.19□□□□□ -0.14
CHMP24386 AL035252.4-201ENST00000624174 288 ntBASIC14.19□□□□□ -0.14
CHMP24386 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHMP24386 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHMP24386 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CHMP24386 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.19□□□□□ -0.14
CHMP24386 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CHMP24386 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHMP24386 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHMP24386 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHMP24386 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CHMP24386 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHMP24386 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHMP24386 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.19□□□□□ -0.14
CHMP24386 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHMP24386 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHMP24386 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHMP24386 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHMP24386 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.19□□□□□ -0.14
CHMP24386 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHMP24386 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHMP24386 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHMP24386 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CHMP24386 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CHMP24386 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CHMP24386 AC005252.3-201ENST00000623855 2258 ntBASIC14.18□□□□□ -0.14
CHMP24386 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
CHMP24386 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CHMP24386 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHMP24386 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CHMP24386 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHMP24386 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CHMP24386 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHMP24386 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHMP24386 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHMP24386 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CHMP24386 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CHMP24386 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.18□□□□□ -0.14
CHMP24386 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHMP24386 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
CHMP24386 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CHMP24386 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
CHMP24386 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.18□□□□□ -0.14
CHMP24386 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHMP24386 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.18□□□□□ -0.14
CHMP24386 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CHMP24386 KRT18P64-201ENST00000434946 1219 ntBASIC14.18□□□□□ -0.14
CHMP24386 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.18□□□□□ -0.14
CHMP24386 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.18□□□□□ -0.14
CHMP24386 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.18□□□□□ -0.14
CHMP24386 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.18□□□□□ -0.14
CHMP24386 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.18□□□□□ -0.14
CHMP24386 AP005018.1-201ENST00000525475 301 ntBASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms