Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
TPM2P07951 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TPM2P07951 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TPM2P07951 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.3■□□□□ 0.36
TPM2P07951 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM2P07951 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC17.3■□□□□ 0.36
TPM2P07951 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC17.3■□□□□ 0.36
TPM2P07951 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM2P07951 AC015818.8-201ENST00000587907 1519 ntBASIC17.3■□□□□ 0.36
TPM2P07951 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM2P07951 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC17.3■□□□□ 0.36
TPM2P07951 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM2P07951 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM2P07951 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TPM2P07951 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TPM2P07951 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC17.3■□□□□ 0.36
TPM2P07951 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TPM2P07951 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM2P07951 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM2P07951 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM2P07951 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM2P07951 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TPM2P07951 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.3■□□□□ 0.36
TPM2P07951 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM2P07951 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM2P07951 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TPM2P07951 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM2P07951 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC17.3■□□□□ 0.36
TPM2P07951 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPM2P07951 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC17.29■□□□□ 0.36
TPM2P07951 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
TPM2P07951 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TPM2P07951 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TPM2P07951 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC17.29■□□□□ 0.36
TPM2P07951 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TPM2P07951 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TPM2P07951 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM2P07951 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TPM2P07951 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM2P07951 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TPM2P07951 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM2P07951 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM2P07951 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM2P07951 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC17.29■□□□□ 0.36
TPM2P07951 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TPM2P07951 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM2P07951 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.29■□□□□ 0.36
TPM2P07951 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TPM2P07951 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC17.29■□□□□ 0.36
TPM2P07951 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TPM2P07951 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC17.29■□□□□ 0.36
TPM2P07951 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM2P07951 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM2P07951 MIR940-201ENST00000401276 94 ntBASIC17.29■□□□□ 0.36
TPM2P07951 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.29■□□□□ 0.36
TPM2P07951 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TPM2P07951 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TPM2P07951 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.29■□□□□ 0.36
TPM2P07951 SLC25A39P2-201ENST00000537614 270 ntBASIC17.29■□□□□ 0.36
TPM2P07951 RARRES2P9-201ENST00000565168 469 ntBASIC17.29■□□□□ 0.36
TPM2P07951 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.29■□□□□ 0.36
TPM2P07951 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.29■□□□□ 0.36
TPM2P07951 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM2P07951 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC17.29■□□□□ 0.36
TPM2P07951 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM2P07951 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC17.29■□□□□ 0.36
TPM2P07951 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM2P07951 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM2P07951 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TPM2P07951 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM2P07951 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TPM2P07951 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TPM2P07951 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TPM2P07951 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TPM2P07951 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TPM2P07951 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM2P07951 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM2P07951 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM2P07951 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM2P07951 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM2P07951 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM2P07951 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TPM2P07951 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM2P07951 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC17.29■□□□□ 0.36
TPM2P07951 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TPM2P07951 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TPM2P07951 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM2P07951 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC17.29■□□□□ 0.36
TPM2P07951 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPM2P07951 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TPM2P07951 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC17.28■□□□□ 0.36
TPM2P07951 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM2P07951 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM2P07951 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.28■□□□□ 0.36
TPM2P07951 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.28■□□□□ 0.36
TPM2P07951 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM2P07951 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.28■□□□□ 0.36
TPM2P07951 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TPM2P07951 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TPM2P07951 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms