Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOA1P02647 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOA1P02647 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
APOA1P02647 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.55□□□□□ -0.24
APOA1P02647 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.55□□□□□ -0.24
APOA1P02647 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.55□□□□□ -0.24
APOA1P02647 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOA1P02647 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOA1P02647 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC13.55□□□□□ -0.24
APOA1P02647 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.55□□□□□ -0.24
APOA1P02647 AC021087.4-201ENST00000563761 564 ntBASIC13.55□□□□□ -0.24
APOA1P02647 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC13.55□□□□□ -0.24
APOA1P02647 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.55□□□□□ -0.24
APOA1P02647 AL009183.1-201ENST00000603760 355 ntBASIC13.55□□□□□ -0.24
APOA1P02647 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.55□□□□□ -0.24
APOA1P02647 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.55□□□□□ -0.24
APOA1P02647 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOA1P02647 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.55□□□□□ -0.24
APOA1P02647 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOA1P02647 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOA1P02647 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOA1P02647 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
APOA1P02647 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.55□□□□□ -0.24
APOA1P02647 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOA1P02647 IER3-202ENST00000376377 1350 ntBASIC13.55□□□□□ -0.24
APOA1P02647 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.55□□□□□ -0.24
APOA1P02647 AC055811.4-201ENST00000624039 1754 ntBASIC13.55□□□□□ -0.24
APOA1P02647 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
APOA1P02647 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOA1P02647 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.55□□□□□ -0.24
APOA1P02647 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOA1P02647 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.55□□□□□ -0.24
APOA1P02647 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.55□□□□□ -0.24
APOA1P02647 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
APOA1P02647 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOA1P02647 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.55□□□□□ -0.24
APOA1P02647 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
APOA1P02647 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.55□□□□□ -0.24
APOA1P02647 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOA1P02647 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOA1P02647 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOA1P02647 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.54□□□□□ -0.24
APOA1P02647 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOA1P02647 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOA1P02647 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOA1P02647 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOA1P02647 AL118506.1-201ENST00000601296 3082 ntBASIC13.54□□□□□ -0.24
APOA1P02647 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOA1P02647 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOA1P02647 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.54□□□□□ -0.24
APOA1P02647 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOA1P02647 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
APOA1P02647 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOA1P02647 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
APOA1P02647 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.54□□□□□ -0.24
APOA1P02647 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.54□□□□□ -0.24
APOA1P02647 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
APOA1P02647 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC13.54□□□□□ -0.24
APOA1P02647 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.54□□□□□ -0.24
APOA1P02647 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOA1P02647 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
APOA1P02647 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.54□□□□□ -0.24
APOA1P02647 PRYP6-201ENST00000514804 343 ntBASIC13.54□□□□□ -0.24
APOA1P02647 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.54□□□□□ -0.24
APOA1P02647 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOA1P02647 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.54□□□□□ -0.24
APOA1P02647 MIR1199-201ENST00000621445 119 ntBASIC13.54□□□□□ -0.24
APOA1P02647 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
APOA1P02647 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
APOA1P02647 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOA1P02647 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOA1P02647 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOA1P02647 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOA1P02647 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOA1P02647 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.54□□□□□ -0.24
APOA1P02647 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOA1P02647 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOA1P02647 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOA1P02647 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.54□□□□□ -0.24
APOA1P02647 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
APOA1P02647 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
APOA1P02647 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOA1P02647 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOA1P02647 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOA1P02647 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOA1P02647 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
APOA1P02647 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOA1P02647 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.54□□□□□ -0.24
APOA1P02647 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.54□□□□□ -0.24
APOA1P02647 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOA1P02647 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOA1P02647 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
APOA1P02647 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOA1P02647 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOA1P02647 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOA1P02647 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOA1P02647 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
APOA1P02647 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
APOA1P02647 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
APOA1P02647 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms