Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC6.53□□□□□ -1.36
USH2AO75445 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
USH2AO75445 BOLA3P2-201ENST00000586496 323 ntBASIC6.53□□□□□ -1.36
USH2AO75445 AP001462.1-201ENST00000594089 452 ntBASIC6.53□□□□□ -1.36
USH2AO75445 AL807742.1-201ENST00000636678 1160 ntTSL 5 BASIC6.53□□□□□ -1.36
USH2AO75445 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
USH2AO75445 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC6.53□□□□□ -1.36
USH2AO75445 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
USH2AO75445 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC6.53□□□□□ -1.36
USH2AO75445 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 TMBIM7P-202ENST00000641474 1516 ntBASIC6.53□□□□□ -1.36
USH2AO75445 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC6.53□□□□□ -1.36
USH2AO75445 GCK-209ENST00000616242 2260 ntTSL 5 BASIC6.53□□□□□ -1.36
USH2AO75445 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC6.53□□□□□ -1.36
USH2AO75445 ZNRD1-204ENST00000376785 754 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
USH2AO75445 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
USH2AO75445 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 AC104961.1-201ENST00000427605 771 ntBASIC6.53□□□□□ -1.36
USH2AO75445 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
USH2AO75445 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC6.53□□□□□ -1.36
USH2AO75445 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC6.53□□□□□ -1.36
USH2AO75445 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
USH2AO75445 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
USH2AO75445 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC6.53□□□□□ -1.36
USH2AO75445 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC6.53□□□□□ -1.36
USH2AO75445 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC6.53□□□□□ -1.36
USH2AO75445 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
USH2AO75445 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC6.53□□□□□ -1.36
USH2AO75445 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
USH2AO75445 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 STX3-207ENST00000633708 3111 ntTSL 5 BASIC6.53□□□□□ -1.36
USH2AO75445 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC6.53□□□□□ -1.36
USH2AO75445 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
USH2AO75445 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 SNORA57-201ENST00000383870 149 ntBASIC6.53□□□□□ -1.36
USH2AO75445 KRT18P36-201ENST00000411618 1276 ntBASIC6.53□□□□□ -1.36
USH2AO75445 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC6.53□□□□□ -1.36
USH2AO75445 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC6.53□□□□□ -1.36
USH2AO75445 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC6.53□□□□□ -1.36
USH2AO75445 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC6.53□□□□□ -1.36
USH2AO75445 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
USH2AO75445 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC6.53□□□□□ -1.36
USH2AO75445 AC023968.2-201ENST00000560593 1049 ntBASIC6.53□□□□□ -1.36
USH2AO75445 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC6.53□□□□□ -1.36
USH2AO75445 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC6.53□□□□□ -1.36
USH2AO75445 AC018695.2-201ENST00000602789 498 ntTSL 5 BASIC6.53□□□□□ -1.36
USH2AO75445 ST5-261ENST00000626808 1071 ntTSL 5 BASIC6.53□□□□□ -1.36
USH2AO75445 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC6.53□□□□□ -1.36
USH2AO75445 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC6.53□□□□□ -1.36
USH2AO75445 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
USH2AO75445 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
USH2AO75445 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC6.53□□□□□ -1.36
USH2AO75445 TREX1-203ENST00000456089 629 ntTSL 3 BASIC6.53□□□□□ -1.36
USH2AO75445 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
USH2AO75445 RN7SL478P-201ENST00000584358 298 ntBASIC6.53□□□□□ -1.36
USH2AO75445 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
USH2AO75445 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
USH2AO75445 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
USH2AO75445 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
USH2AO75445 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
USH2AO75445 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
USH2AO75445 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
USH2AO75445 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
USH2AO75445 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
USH2AO75445 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
USH2AO75445 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
USH2AO75445 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
USH2AO75445 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC6.52□□□□□ -1.37
USH2AO75445 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
USH2AO75445 AC022447.5-201ENST00000504817 392 ntBASIC6.52□□□□□ -1.37
USH2AO75445 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC6.52□□□□□ -1.37
USH2AO75445 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC6.52□□□□□ -1.37
USH2AO75445 NEK4P3-201ENST00000604859 544 ntBASIC6.52□□□□□ -1.37
USH2AO75445 AL591424.3-201ENST00000614278 872 ntBASIC6.52□□□□□ -1.37
USH2AO75445 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms