Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF13O43567 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.83□□□□□ -0.2
RNF13O43567 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.83□□□□□ -0.2
RNF13O43567 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF13O43567 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.83□□□□□ -0.2
RNF13O43567 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF13O43567 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF13O43567 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF13O43567 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF13O43567 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.83□□□□□ -0.2
RNF13O43567 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF13O43567 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RNF13O43567 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
RNF13O43567 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF13O43567 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
RNF13O43567 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.83□□□□□ -0.2
RNF13O43567 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.83□□□□□ -0.2
RNF13O43567 AL589987.1-201ENST00000453380 819 ntBASIC13.83□□□□□ -0.2
RNF13O43567 SPDYE18-201ENST00000510091 1050 ntBASIC13.83□□□□□ -0.2
RNF13O43567 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.83□□□□□ -0.2
RNF13O43567 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.83□□□□□ -0.2
RNF13O43567 AL390955.2-201ENST00000603032 514 ntBASIC13.83□□□□□ -0.2
RNF13O43567 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
RNF13O43567 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF13O43567 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF13O43567 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RNF13O43567 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.83□□□□□ -0.2
RNF13O43567 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF13O43567 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF13O43567 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.83□□□□□ -0.2
RNF13O43567 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RNF13O43567 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF13O43567 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RNF13O43567 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF13O43567 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
RNF13O43567 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RNF13O43567 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RNF13O43567 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
RNF13O43567 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.82□□□□□ -0.2
RNF13O43567 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RNF13O43567 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF13O43567 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF13O43567 REXO1L4P-201ENST00000605109 1937 ntBASIC13.82□□□□□ -0.2
RNF13O43567 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF13O43567 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
RNF13O43567 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.82□□□□□ -0.2
RNF13O43567 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
RNF13O43567 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.82□□□□□ -0.2
RNF13O43567 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RNF13O43567 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
RNF13O43567 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF13O43567 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF13O43567 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF13O43567 PMS2P2-201ENST00000425039 1128 ntBASIC13.82□□□□□ -0.2
RNF13O43567 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.82□□□□□ -0.2
RNF13O43567 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RNF13O43567 AC092183.1-201ENST00000469884 875 ntBASIC13.82□□□□□ -0.2
RNF13O43567 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.82□□□□□ -0.2
RNF13O43567 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
RNF13O43567 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.82□□□□□ -0.2
RNF13O43567 AC104794.3-201ENST00000566840 1248 ntBASIC13.82□□□□□ -0.2
RNF13O43567 AC036164.1-201ENST00000570544 333 ntBASIC13.82□□□□□ -0.2
RNF13O43567 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
RNF13O43567 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.82□□□□□ -0.2
RNF13O43567 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RNF13O43567 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF13O43567 REXO1L2P-201ENST00000425429 2069 ntBASIC13.82□□□□□ -0.2
RNF13O43567 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF13O43567 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.82□□□□□ -0.2
RNF13O43567 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF13O43567 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF13O43567 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
RNF13O43567 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.82□□□□□ -0.2
RNF13O43567 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RNF13O43567 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF13O43567 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF13O43567 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF13O43567 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RNF13O43567 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RNF13O43567 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.82□□□□□ -0.2
RNF13O43567 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
RNF13O43567 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF13O43567 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RNF13O43567 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RNF13O43567 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF13O43567 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RNF13O43567 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
RNF13O43567 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF13O43567 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF13O43567 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF13O43567 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RNF13O43567 CLK3P2-201ENST00000427566 1453 ntBASIC13.81□□□□□ -0.2
RNF13O43567 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF13O43567 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
RNF13O43567 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF13O43567 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF13O43567 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RNF13O43567 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.81□□□□□ -0.2
RNF13O43567 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF13O43567 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms