Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM1O00151 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM1O00151 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM1O00151 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM1O00151 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM1O00151 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM1O00151 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.5□□□□□ -0.09
PDLIM1O00151 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM1O00151 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.5□□□□□ -0.09
PDLIM1O00151 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
PDLIM1O00151 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM1O00151 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.5□□□□□ -0.09
PDLIM1O00151 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.5□□□□□ -0.09
PDLIM1O00151 AC142381.1-201ENST00000426099 345 ntBASIC14.5□□□□□ -0.09
PDLIM1O00151 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM1O00151 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.5□□□□□ -0.09
PDLIM1O00151 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM1O00151 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.5□□□□□ -0.09
PDLIM1O00151 AC105233.2-201ENST00000523697 349 ntBASIC14.5□□□□□ -0.09
PDLIM1O00151 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.5□□□□□ -0.09
PDLIM1O00151 AF228730.5-201ENST00000530288 346 ntBASIC14.5□□□□□ -0.09
PDLIM1O00151 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.5□□□□□ -0.09
PDLIM1O00151 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.5□□□□□ -0.09
PDLIM1O00151 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.5□□□□□ -0.09
PDLIM1O00151 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.5□□□□□ -0.09
PDLIM1O00151 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.5□□□□□ -0.09
PDLIM1O00151 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.5□□□□□ -0.09
PDLIM1O00151 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
PDLIM1O00151 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
PDLIM1O00151 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM1O00151 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.5□□□□□ -0.09
PDLIM1O00151 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM1O00151 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
PDLIM1O00151 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM1O00151 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM1O00151 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PDLIM1O00151 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.5□□□□□ -0.09
PDLIM1O00151 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM1O00151 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
PDLIM1O00151 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PDLIM1O00151 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM1O00151 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
PDLIM1O00151 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.5□□□□□ -0.09
PDLIM1O00151 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.5□□□□□ -0.09
PDLIM1O00151 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.5□□□□□ -0.09
PDLIM1O00151 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.5□□□□□ -0.09
PDLIM1O00151 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM1O00151 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM1O00151 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM1O00151 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM1O00151 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM1O00151 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM1O00151 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM1O00151 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM1O00151 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM1O00151 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM1O00151 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.49□□□□□ -0.09
PDLIM1O00151 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM1O00151 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM1O00151 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM1O00151 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM1O00151 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM1O00151 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM1O00151 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PDLIM1O00151 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.49□□□□□ -0.09
PDLIM1O00151 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.49□□□□□ -0.09
PDLIM1O00151 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM1O00151 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.49□□□□□ -0.09
PDLIM1O00151 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.49□□□□□ -0.09
PDLIM1O00151 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM1O00151 FAM58DP-201ENST00000428076 619 ntBASIC14.49□□□□□ -0.09
PDLIM1O00151 GPS2P2-201ENST00000430745 888 ntBASIC14.49□□□□□ -0.09
PDLIM1O00151 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.49□□□□□ -0.09
PDLIM1O00151 AC005237.2-201ENST00000434368 219 ntBASIC14.49□□□□□ -0.09
PDLIM1O00151 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PDLIM1O00151 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM1O00151 IGHV3-62-201ENST00000520057 340 ntBASIC14.49□□□□□ -0.09
PDLIM1O00151 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.49□□□□□ -0.09
PDLIM1O00151 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.49□□□□□ -0.09
PDLIM1O00151 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.49□□□□□ -0.09
PDLIM1O00151 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM1O00151 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM1O00151 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM1O00151 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM1O00151 FOXO1B-201ENST00000504678 1527 ntBASIC14.49□□□□□ -0.09
PDLIM1O00151 AC015818.8-201ENST00000587907 1519 ntBASIC14.49□□□□□ -0.09
PDLIM1O00151 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.49□□□□□ -0.09
PDLIM1O00151 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
PDLIM1O00151 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM1O00151 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PDLIM1O00151 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM1O00151 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.49□□□□□ -0.09
PDLIM1O00151 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM1O00151 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
PDLIM1O00151 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM1O00151 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM1O00151 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.49□□□□□ -0.09
PDLIM1O00151 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDLIM1O00151 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
PDLIM1O00151 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms