Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LRIT2A6NDA9 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRIT2A6NDA9 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
LRIT2A6NDA9 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
LRIT2A6NDA9 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 AC018665.1-201ENST00000622927 1362 ntBASIC14.36□□□□□ -0.11
LRIT2A6NDA9 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 GAPDHP21-201ENST00000450301 1010 ntBASIC14.36□□□□□ -0.11
LRIT2A6NDA9 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 FO681548.1-201ENST00000455617 1132 ntBASIC14.36□□□□□ -0.11
LRIT2A6NDA9 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 RN7SL48P-201ENST00000579283 293 ntBASIC14.36□□□□□ -0.11
LRIT2A6NDA9 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 AC132938.4-201ENST00000623835 848 ntBASIC14.36□□□□□ -0.11
LRIT2A6NDA9 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LRIT2A6NDA9 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRIT2A6NDA9 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRIT2A6NDA9 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRIT2A6NDA9 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRIT2A6NDA9 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRIT2A6NDA9 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRIT2A6NDA9 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.35□□□□□ -0.11
LRIT2A6NDA9 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRIT2A6NDA9 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
LRIT2A6NDA9 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.35□□□□□ -0.11
LRIT2A6NDA9 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.35□□□□□ -0.11
LRIT2A6NDA9 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRIT2A6NDA9 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.35□□□□□ -0.11
LRIT2A6NDA9 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
LRIT2A6NDA9 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRIT2A6NDA9 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRIT2A6NDA9 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRIT2A6NDA9 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.35□□□□□ -0.11
LRIT2A6NDA9 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.35□□□□□ -0.11
LRIT2A6NDA9 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRIT2A6NDA9 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
LRIT2A6NDA9 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
LRIT2A6NDA9 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.35□□□□□ -0.11
LRIT2A6NDA9 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.35□□□□□ -0.11
LRIT2A6NDA9 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.35□□□□□ -0.11
LRIT2A6NDA9 AC025279.2-201ENST00000569730 653 ntBASIC14.35□□□□□ -0.11
LRIT2A6NDA9 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
LRIT2A6NDA9 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.35□□□□□ -0.11
LRIT2A6NDA9 ENPP7P14-201ENST00000621765 1040 ntBASIC14.35□□□□□ -0.11
LRIT2A6NDA9 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRIT2A6NDA9 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms