Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
PCDHB13Q9Y5F0 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHB13Q9Y5F0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHB13Q9Y5F0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC25.35■■□□□ 1.65
PCDHB13Q9Y5F0 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHB13Q9Y5F0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.35■■□□□ 1.65
PCDHB13Q9Y5F0 AC009299.2-201ENST00000482477 511 ntBASIC25.35■■□□□ 1.65
PCDHB13Q9Y5F0 Z92544.1-202ENST00000571933 1220 ntBASIC25.35■■□□□ 1.65
PCDHB13Q9Y5F0 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHB13Q9Y5F0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHB13Q9Y5F0 AC021242.3-201ENST00000607598 1377 ntBASIC25.34■■□□□ 1.65
PCDHB13Q9Y5F0 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
PCDHB13Q9Y5F0 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC25.34■■□□□ 1.65
PCDHB13Q9Y5F0 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHB13Q9Y5F0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.34■■□□□ 1.65
PCDHB13Q9Y5F0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.34■■□□□ 1.65
PCDHB13Q9Y5F0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHB13Q9Y5F0 AC004812.2-201ENST00000611079 2094 ntBASIC25.33■■□□□ 1.65
PCDHB13Q9Y5F0 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHB13Q9Y5F0 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
PCDHB13Q9Y5F0 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHB13Q9Y5F0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25.33■■□□□ 1.65
PCDHB13Q9Y5F0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC25.33■■□□□ 1.65
PCDHB13Q9Y5F0 SHD-204ENST00000599689 1729 ntTSL 5 BASIC25.33■■□□□ 1.65
PCDHB13Q9Y5F0 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC25.33■■□□□ 1.65
PCDHB13Q9Y5F0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC25.33■■□□□ 1.65
PCDHB13Q9Y5F0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC25.33■■□□□ 1.65
PCDHB13Q9Y5F0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC25.33■■□□□ 1.65
PCDHB13Q9Y5F0 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC25.33■■□□□ 1.64
PCDHB13Q9Y5F0 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC25.32■■□□□ 1.64
PCDHB13Q9Y5F0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHB13Q9Y5F0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
PCDHB13Q9Y5F0 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHB13Q9Y5F0 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC25.32■■□□□ 1.64
PCDHB13Q9Y5F0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHB13Q9Y5F0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
PCDHB13Q9Y5F0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHB13Q9Y5F0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.31■■□□□ 1.64
PCDHB13Q9Y5F0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
PCDHB13Q9Y5F0 AC004448.1-201ENST00000458332 883 ntBASIC25.31■■□□□ 1.64
PCDHB13Q9Y5F0 KRT125P-201ENST00000546827 989 ntBASIC25.31■■□□□ 1.64
PCDHB13Q9Y5F0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC25.31■■□□□ 1.64
PCDHB13Q9Y5F0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHB13Q9Y5F0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHB13Q9Y5F0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
PCDHB13Q9Y5F0 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
PCDHB13Q9Y5F0 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
PCDHB13Q9Y5F0 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHB13Q9Y5F0 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC25.3■■□□□ 1.64
PCDHB13Q9Y5F0 LSM7-203ENST00000585409 512 ntTSL 2 BASIC25.3■■□□□ 1.64
PCDHB13Q9Y5F0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.3■■□□□ 1.64
PCDHB13Q9Y5F0 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHB13Q9Y5F0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC25.3■■□□□ 1.64
PCDHB13Q9Y5F0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC25.3■■□□□ 1.64
PCDHB13Q9Y5F0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHB13Q9Y5F0 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
PCDHB13Q9Y5F0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHB13Q9Y5F0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC25.29■■□□□ 1.64
PCDHB13Q9Y5F0 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
PCDHB13Q9Y5F0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
PCDHB13Q9Y5F0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHB13Q9Y5F0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.28■■□□□ 1.64
PCDHB13Q9Y5F0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
PCDHB13Q9Y5F0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.28■■□□□ 1.64
PCDHB13Q9Y5F0 AC239859.2-201ENST00000444165 318 ntBASIC25.28■■□□□ 1.64
PCDHB13Q9Y5F0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC25.28■■□□□ 1.64
PCDHB13Q9Y5F0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHB13Q9Y5F0 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHB13Q9Y5F0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHB13Q9Y5F0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHB13Q9Y5F0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
PCDHB13Q9Y5F0 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHB13Q9Y5F0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHB13Q9Y5F0 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHB13Q9Y5F0 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHB13Q9Y5F0 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC25.26■■□□□ 1.63
PCDHB13Q9Y5F0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHB13Q9Y5F0 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
PCDHB13Q9Y5F0 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHB13Q9Y5F0 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHB13Q9Y5F0 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHB13Q9Y5F0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHB13Q9Y5F0 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHB13Q9Y5F0 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHB13Q9Y5F0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHB13Q9Y5F0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHB13Q9Y5F0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHB13Q9Y5F0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.25■■□□□ 1.63
PCDHB13Q9Y5F0 SNX5-217ENST00000606557 1087 ntBASIC25.25■■□□□ 1.63
PCDHB13Q9Y5F0 MIR4787-201ENST00000607364 84 ntBASIC25.25■■□□□ 1.63
PCDHB13Q9Y5F0 AL035685.1-201ENST00000636663 812 ntBASIC25.25■■□□□ 1.63
PCDHB13Q9Y5F0 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHB13Q9Y5F0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC25.25■■□□□ 1.63
PCDHB13Q9Y5F0 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHB13Q9Y5F0 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC25.25■■□□□ 1.63
PCDHB13Q9Y5F0 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHB13Q9Y5F0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC25.24■■□□□ 1.63
PCDHB13Q9Y5F0 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHB13Q9Y5F0 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHB13Q9Y5F0 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms