Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
COMMD9Q9P000 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
COMMD9Q9P000 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COMMD9Q9P000 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
COMMD9Q9P000 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COMMD9Q9P000 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COMMD9Q9P000 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COMMD9Q9P000 LINC00565-201ENST00000562710 2331 ntBASIC19.46■□□□□ 0.71
COMMD9Q9P000 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.46■□□□□ 0.71
COMMD9Q9P000 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COMMD9Q9P000 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
COMMD9Q9P000 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
COMMD9Q9P000 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.45■□□□□ 0.7
COMMD9Q9P000 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
COMMD9Q9P000 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COMMD9Q9P000 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.45■□□□□ 0.7
COMMD9Q9P000 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.45■□□□□ 0.7
COMMD9Q9P000 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
COMMD9Q9P000 AC233723.2-201ENST00000623798 2106 ntBASIC19.45■□□□□ 0.7
COMMD9Q9P000 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COMMD9Q9P000 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
COMMD9Q9P000 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.45■□□□□ 0.7
COMMD9Q9P000 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.45■□□□□ 0.7
COMMD9Q9P000 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COMMD9Q9P000 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
COMMD9Q9P000 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COMMD9Q9P000 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
COMMD9Q9P000 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.44■□□□□ 0.7
COMMD9Q9P000 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COMMD9Q9P000 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.44■□□□□ 0.7
COMMD9Q9P000 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COMMD9Q9P000 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.44■□□□□ 0.7
COMMD9Q9P000 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COMMD9Q9P000 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
COMMD9Q9P000 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COMMD9Q9P000 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.43■□□□□ 0.7
COMMD9Q9P000 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
COMMD9Q9P000 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.43■□□□□ 0.7
COMMD9Q9P000 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.43■□□□□ 0.7
COMMD9Q9P000 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COMMD9Q9P000 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COMMD9Q9P000 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COMMD9Q9P000 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COMMD9Q9P000 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
COMMD9Q9P000 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
COMMD9Q9P000 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.42■□□□□ 0.7
COMMD9Q9P000 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.42■□□□□ 0.7
COMMD9Q9P000 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COMMD9Q9P000 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COMMD9Q9P000 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.42■□□□□ 0.7
COMMD9Q9P000 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COMMD9Q9P000 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.42■□□□□ 0.7
COMMD9Q9P000 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.42■□□□□ 0.7
COMMD9Q9P000 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
COMMD9Q9P000 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
COMMD9Q9P000 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COMMD9Q9P000 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.41■□□□□ 0.7
COMMD9Q9P000 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
COMMD9Q9P000 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COMMD9Q9P000 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COMMD9Q9P000 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COMMD9Q9P000 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
COMMD9Q9P000 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COMMD9Q9P000 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COMMD9Q9P000 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COMMD9Q9P000 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
COMMD9Q9P000 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
COMMD9Q9P000 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COMMD9Q9P000 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COMMD9Q9P000 EP400NL-214ENST00000641289 2402 ntBASIC19.4■□□□□ 0.7
COMMD9Q9P000 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COMMD9Q9P000 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
COMMD9Q9P000 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COMMD9Q9P000 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.39■□□□□ 0.69
COMMD9Q9P000 MIR3648-2-201ENST00000581792 180 ntBASIC19.39■□□□□ 0.69
COMMD9Q9P000 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.39■□□□□ 0.69
COMMD9Q9P000 MIR3648-1-201ENST00000615959 180 ntBASIC19.39■□□□□ 0.69
COMMD9Q9P000 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.39■□□□□ 0.69
COMMD9Q9P000 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COMMD9Q9P000 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COMMD9Q9P000 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COMMD9Q9P000 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
COMMD9Q9P000 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.39■□□□□ 0.69
COMMD9Q9P000 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COMMD9Q9P000 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
COMMD9Q9P000 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COMMD9Q9P000 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
COMMD9Q9P000 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COMMD9Q9P000 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COMMD9Q9P000 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COMMD9Q9P000 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
COMMD9Q9P000 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.38■□□□□ 0.69
COMMD9Q9P000 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
COMMD9Q9P000 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COMMD9Q9P000 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COMMD9Q9P000 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COMMD9Q9P000 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COMMD9Q9P000 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
COMMD9Q9P000 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COMMD9Q9P000 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms