Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBQLN4Q9NRR5 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBQLN4Q9NRR5 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.14■□□□□ 0.97
UBQLN4Q9NRR5 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBQLN4Q9NRR5 BX664725.1-201ENST00000438252 379 ntBASIC21.13■□□□□ 0.97
UBQLN4Q9NRR5 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBQLN4Q9NRR5 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
UBQLN4Q9NRR5 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBQLN4Q9NRR5 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBQLN4Q9NRR5 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBQLN4Q9NRR5 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
UBQLN4Q9NRR5 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
UBQLN4Q9NRR5 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.12■□□□□ 0.97
UBQLN4Q9NRR5 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
UBQLN4Q9NRR5 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBQLN4Q9NRR5 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
UBQLN4Q9NRR5 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBQLN4Q9NRR5 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.12■□□□□ 0.97
UBQLN4Q9NRR5 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBQLN4Q9NRR5 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.12■□□□□ 0.97
UBQLN4Q9NRR5 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.12■□□□□ 0.97
UBQLN4Q9NRR5 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
UBQLN4Q9NRR5 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
UBQLN4Q9NRR5 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
UBQLN4Q9NRR5 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UBQLN4Q9NRR5 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.11■□□□□ 0.97
UBQLN4Q9NRR5 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.11■□□□□ 0.97
UBQLN4Q9NRR5 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
UBQLN4Q9NRR5 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
UBQLN4Q9NRR5 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UBQLN4Q9NRR5 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
UBQLN4Q9NRR5 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
UBQLN4Q9NRR5 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
UBQLN4Q9NRR5 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UBQLN4Q9NRR5 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UBQLN4Q9NRR5 AC004448.1-201ENST00000458332 883 ntBASIC21.1■□□□□ 0.97
UBQLN4Q9NRR5 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.1■□□□□ 0.97
UBQLN4Q9NRR5 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.1■□□□□ 0.97
UBQLN4Q9NRR5 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.1■□□□□ 0.97
UBQLN4Q9NRR5 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.1■□□□□ 0.97
UBQLN4Q9NRR5 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.1■□□□□ 0.97
UBQLN4Q9NRR5 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
UBQLN4Q9NRR5 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.09■□□□□ 0.97
UBQLN4Q9NRR5 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.09■□□□□ 0.97
UBQLN4Q9NRR5 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.09■□□□□ 0.97
UBQLN4Q9NRR5 Z92544.1-202ENST00000571933 1220 ntBASIC21.09■□□□□ 0.97
UBQLN4Q9NRR5 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.09■□□□□ 0.97
UBQLN4Q9NRR5 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
UBQLN4Q9NRR5 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBQLN4Q9NRR5 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
UBQLN4Q9NRR5 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
UBQLN4Q9NRR5 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBQLN4Q9NRR5 AC021242.3-201ENST00000607598 1377 ntBASIC21.09■□□□□ 0.97
UBQLN4Q9NRR5 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
UBQLN4Q9NRR5 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBQLN4Q9NRR5 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBQLN4Q9NRR5 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBQLN4Q9NRR5 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
UBQLN4Q9NRR5 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBQLN4Q9NRR5 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
UBQLN4Q9NRR5 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.08■□□□□ 0.97
UBQLN4Q9NRR5 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
UBQLN4Q9NRR5 ABCB10P4-201ENST00000566803 2184 ntBASIC21.08■□□□□ 0.97
UBQLN4Q9NRR5 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
UBQLN4Q9NRR5 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
UBQLN4Q9NRR5 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.08■□□□□ 0.96
UBQLN4Q9NRR5 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBQLN4Q9NRR5 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBQLN4Q9NRR5 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBQLN4Q9NRR5 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
UBQLN4Q9NRR5 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.07■□□□□ 0.96
UBQLN4Q9NRR5 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBQLN4Q9NRR5 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
UBQLN4Q9NRR5 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBQLN4Q9NRR5 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBQLN4Q9NRR5 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.07■□□□□ 0.96
UBQLN4Q9NRR5 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
UBQLN4Q9NRR5 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBQLN4Q9NRR5 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
UBQLN4Q9NRR5 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
UBQLN4Q9NRR5 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
UBQLN4Q9NRR5 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.06■□□□□ 0.96
UBQLN4Q9NRR5 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.06■□□□□ 0.96
UBQLN4Q9NRR5 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
UBQLN4Q9NRR5 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.06■□□□□ 0.96
UBQLN4Q9NRR5 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.06■□□□□ 0.96
UBQLN4Q9NRR5 AC009299.2-201ENST00000482477 511 ntBASIC21.06■□□□□ 0.96
UBQLN4Q9NRR5 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.06■□□□□ 0.96
UBQLN4Q9NRR5 KRT125P-201ENST00000546827 989 ntBASIC21.06■□□□□ 0.96
UBQLN4Q9NRR5 AL451085.2-201ENST00000605085 799 ntBASIC21.06■□□□□ 0.96
UBQLN4Q9NRR5 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBQLN4Q9NRR5 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
UBQLN4Q9NRR5 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBQLN4Q9NRR5 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBQLN4Q9NRR5 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBQLN4Q9NRR5 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBQLN4Q9NRR5 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBQLN4Q9NRR5 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBQLN4Q9NRR5 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBQLN4Q9NRR5 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms