Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.96■■□□□ 1.43
CD248Q9HCU0 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CD248Q9HCU0 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.96■■□□□ 1.43
CD248Q9HCU0 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
CD248Q9HCU0 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.96■■□□□ 1.43
CD248Q9HCU0 TSPY9P-201ENST00000440215 945 ntBASIC23.96■■□□□ 1.43
CD248Q9HCU0 TSPY11P-201ENST00000442607 1045 ntBASIC23.96■■□□□ 1.43
CD248Q9HCU0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.96■■□□□ 1.43
CD248Q9HCU0 AC011551.1-201ENST00000614101 683 ntBASIC23.96■■□□□ 1.43
CD248Q9HCU0 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CD248Q9HCU0 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CD248Q9HCU0 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CD248Q9HCU0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.95■■□□□ 1.42
CD248Q9HCU0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.95■■□□□ 1.42
CD248Q9HCU0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.95■■□□□ 1.42
CD248Q9HCU0 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CD248Q9HCU0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CD248Q9HCU0 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.95■■□□□ 1.42
CD248Q9HCU0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
CD248Q9HCU0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CD248Q9HCU0 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CD248Q9HCU0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.94■■□□□ 1.42
CD248Q9HCU0 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CD248Q9HCU0 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CD248Q9HCU0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CD248Q9HCU0 AL139125.2-201ENST00000623134 1869 ntBASIC23.93■■□□□ 1.42
CD248Q9HCU0 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
CD248Q9HCU0 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
CD248Q9HCU0 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CD248Q9HCU0 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CD248Q9HCU0 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CD248Q9HCU0 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.92■■□□□ 1.42
CD248Q9HCU0 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
CD248Q9HCU0 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CD248Q9HCU0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CD248Q9HCU0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.91■■□□□ 1.42
CD248Q9HCU0 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
CD248Q9HCU0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CD248Q9HCU0 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CD248Q9HCU0 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.91■■□□□ 1.42
CD248Q9HCU0 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
CD248Q9HCU0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
CD248Q9HCU0 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
CD248Q9HCU0 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.9■■□□□ 1.42
CD248Q9HCU0 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
CD248Q9HCU0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CD248Q9HCU0 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.9■■□□□ 1.42
CD248Q9HCU0 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CD248Q9HCU0 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CD248Q9HCU0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CD248Q9HCU0 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CD248Q9HCU0 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CD248Q9HCU0 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.89■■□□□ 1.42
CD248Q9HCU0 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CD248Q9HCU0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CD248Q9HCU0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.89■■□□□ 1.41
CD248Q9HCU0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.89■■□□□ 1.41
CD248Q9HCU0 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.89■■□□□ 1.41
CD248Q9HCU0 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
CD248Q9HCU0 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
CD248Q9HCU0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CD248Q9HCU0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CD248Q9HCU0 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.88■■□□□ 1.41
CD248Q9HCU0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.88■■□□□ 1.41
CD248Q9HCU0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.88■■□□□ 1.41
CD248Q9HCU0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.88■■□□□ 1.41
CD248Q9HCU0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
CD248Q9HCU0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.88■■□□□ 1.41
CD248Q9HCU0 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CD248Q9HCU0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
CD248Q9HCU0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.88■■□□□ 1.41
CD248Q9HCU0 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CD248Q9HCU0 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CD248Q9HCU0 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CD248Q9HCU0 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CD248Q9HCU0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.87■■□□□ 1.41
CD248Q9HCU0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.87■■□□□ 1.41
CD248Q9HCU0 AC131281.2-201ENST00000520478 145 ntBASIC23.87■■□□□ 1.41
CD248Q9HCU0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.87■■□□□ 1.41
CD248Q9HCU0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CD248Q9HCU0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
CD248Q9HCU0 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
CD248Q9HCU0 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CD248Q9HCU0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.87■■□□□ 1.41
CD248Q9HCU0 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CD248Q9HCU0 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CD248Q9HCU0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CD248Q9HCU0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CD248Q9HCU0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CD248Q9HCU0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CD248Q9HCU0 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.86■■□□□ 1.41
CD248Q9HCU0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.86■■□□□ 1.41
CD248Q9HCU0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CD248Q9HCU0 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
CD248Q9HCU0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.86■■□□□ 1.41
CD248Q9HCU0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CD248Q9HCU0 AF131216.4-201ENST00000638924 1588 ntBASIC23.86■■□□□ 1.41
CD248Q9HCU0 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CD248Q9HCU0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CD248Q9HCU0 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms