Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PCDH18Q9HCL0 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDH18Q9HCL0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PCDH18Q9HCL0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDH18Q9HCL0 AL022069.1-201ENST00000568025 1636 ntBASIC23.84■■□□□ 1.41
PCDH18Q9HCL0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDH18Q9HCL0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.84■■□□□ 1.41
PCDH18Q9HCL0 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
PCDH18Q9HCL0 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.84■■□□□ 1.41
PCDH18Q9HCL0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDH18Q9HCL0 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
PCDH18Q9HCL0 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDH18Q9HCL0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDH18Q9HCL0 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDH18Q9HCL0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDH18Q9HCL0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDH18Q9HCL0 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.83■■□□□ 1.41
PCDH18Q9HCL0 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PCDH18Q9HCL0 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.83■■□□□ 1.41
PCDH18Q9HCL0 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.83■■□□□ 1.41
PCDH18Q9HCL0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PCDH18Q9HCL0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PCDH18Q9HCL0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDH18Q9HCL0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
PCDH18Q9HCL0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDH18Q9HCL0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDH18Q9HCL0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDH18Q9HCL0 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDH18Q9HCL0 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.82■■□□□ 1.4
PCDH18Q9HCL0 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
PCDH18Q9HCL0 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDH18Q9HCL0 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDH18Q9HCL0 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDH18Q9HCL0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.82■■□□□ 1.4
PCDH18Q9HCL0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH18Q9HCL0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH18Q9HCL0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH18Q9HCL0 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH18Q9HCL0 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.81■■□□□ 1.4
PCDH18Q9HCL0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.81■■□□□ 1.4
PCDH18Q9HCL0 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH18Q9HCL0 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH18Q9HCL0 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDH18Q9HCL0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
PCDH18Q9HCL0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDH18Q9HCL0 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDH18Q9HCL0 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.8■■□□□ 1.4
PCDH18Q9HCL0 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDH18Q9HCL0 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.8■■□□□ 1.4
PCDH18Q9HCL0 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDH18Q9HCL0 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDH18Q9HCL0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PCDH18Q9HCL0 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.79■■□□□ 1.4
PCDH18Q9HCL0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDH18Q9HCL0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDH18Q9HCL0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.78■■□□□ 1.4
PCDH18Q9HCL0 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDH18Q9HCL0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDH18Q9HCL0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.78■■□□□ 1.4
PCDH18Q9HCL0 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.78■■□□□ 1.4
PCDH18Q9HCL0 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDH18Q9HCL0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
PCDH18Q9HCL0 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDH18Q9HCL0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDH18Q9HCL0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PCDH18Q9HCL0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.77■■□□□ 1.4
PCDH18Q9HCL0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.77■■□□□ 1.4
PCDH18Q9HCL0 AL031848.2-201ENST00000607670 837 ntBASIC23.77■■□□□ 1.4
PCDH18Q9HCL0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDH18Q9HCL0 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PCDH18Q9HCL0 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDH18Q9HCL0 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
PCDH18Q9HCL0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.76■■□□□ 1.39
PCDH18Q9HCL0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDH18Q9HCL0 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDH18Q9HCL0 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
PCDH18Q9HCL0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDH18Q9HCL0 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDH18Q9HCL0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDH18Q9HCL0 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.76■■□□□ 1.39
PCDH18Q9HCL0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.76■■□□□ 1.39
PCDH18Q9HCL0 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
PCDH18Q9HCL0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDH18Q9HCL0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.75■■□□□ 1.39
PCDH18Q9HCL0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.75■■□□□ 1.39
PCDH18Q9HCL0 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDH18Q9HCL0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDH18Q9HCL0 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDH18Q9HCL0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDH18Q9HCL0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDH18Q9HCL0 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.74■■□□□ 1.39
PCDH18Q9HCL0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.74■■□□□ 1.39
PCDH18Q9HCL0 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDH18Q9HCL0 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.74■■□□□ 1.39
PCDH18Q9HCL0 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDH18Q9HCL0 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.74■■□□□ 1.39
PCDH18Q9HCL0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.74■■□□□ 1.39
PCDH18Q9HCL0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDH18Q9HCL0 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDH18Q9HCL0 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms