Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 IKBKGP1-201ENST00000612193 1073 ntBASIC26.31■■□□□ 1.8
U2AF1L4Q8WU68 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
U2AF1L4Q8WU68 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
U2AF1L4Q8WU68 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
U2AF1L4Q8WU68 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
U2AF1L4Q8WU68 JTB-203ENST00000368589 1216 ntTSL 2 BASIC26.3■■□□□ 1.8
U2AF1L4Q8WU68 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
U2AF1L4Q8WU68 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC26.3■■□□□ 1.8
U2AF1L4Q8WU68 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.3■■□□□ 1.8
U2AF1L4Q8WU68 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
U2AF1L4Q8WU68 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC26.29■■□□□ 1.8
U2AF1L4Q8WU68 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
U2AF1L4Q8WU68 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
U2AF1L4Q8WU68 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
U2AF1L4Q8WU68 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
U2AF1L4Q8WU68 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
U2AF1L4Q8WU68 AC092171.4-201ENST00000609130 632 ntBASIC26.29■■□□□ 1.8
U2AF1L4Q8WU68 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC26.29■■□□□ 1.8
U2AF1L4Q8WU68 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
U2AF1L4Q8WU68 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
U2AF1L4Q8WU68 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
U2AF1L4Q8WU68 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
U2AF1L4Q8WU68 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC26.28■■□□□ 1.8
U2AF1L4Q8WU68 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
U2AF1L4Q8WU68 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC26.28■■□□□ 1.8
U2AF1L4Q8WU68 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
U2AF1L4Q8WU68 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
U2AF1L4Q8WU68 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.28■■□□□ 1.8
U2AF1L4Q8WU68 FOXO3B-201ENST00000395675 1928 ntBASIC26.27■■□□□ 1.8
U2AF1L4Q8WU68 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
U2AF1L4Q8WU68 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
U2AF1L4Q8WU68 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC26.27■■□□□ 1.8
U2AF1L4Q8WU68 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.27■■□□□ 1.8
U2AF1L4Q8WU68 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC26.27■■□□□ 1.8
U2AF1L4Q8WU68 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
U2AF1L4Q8WU68 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
U2AF1L4Q8WU68 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
U2AF1L4Q8WU68 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
U2AF1L4Q8WU68 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC26.26■■□□□ 1.79
U2AF1L4Q8WU68 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
U2AF1L4Q8WU68 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
U2AF1L4Q8WU68 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC26.26■■□□□ 1.79
U2AF1L4Q8WU68 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
U2AF1L4Q8WU68 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.26■■□□□ 1.79
U2AF1L4Q8WU68 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
U2AF1L4Q8WU68 SERBP1P1-201ENST00000396021 1160 ntBASIC26.25■■□□□ 1.79
U2AF1L4Q8WU68 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC26.25■■□□□ 1.79
U2AF1L4Q8WU68 RHOF-204ENST00000537265 699 ntTSL 2 BASIC26.25■■□□□ 1.79
U2AF1L4Q8WU68 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC26.25■■□□□ 1.79
U2AF1L4Q8WU68 AC022517.1-201ENST00000592429 346 ntBASIC26.25■■□□□ 1.79
U2AF1L4Q8WU68 AC008764.7-201ENST00000593779 1081 ntBASIC26.25■■□□□ 1.79
U2AF1L4Q8WU68 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
U2AF1L4Q8WU68 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC26.25■■□□□ 1.79
U2AF1L4Q8WU68 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
U2AF1L4Q8WU68 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
U2AF1L4Q8WU68 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
U2AF1L4Q8WU68 LBH-205ENST00000407930 756 ntTSL 2 BASIC26.24■■□□□ 1.79
U2AF1L4Q8WU68 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC26.24■■□□□ 1.79
U2AF1L4Q8WU68 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
U2AF1L4Q8WU68 DUSP8P4-201ENST00000399538 1761 ntBASIC26.24■■□□□ 1.79
U2AF1L4Q8WU68 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
U2AF1L4Q8WU68 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
U2AF1L4Q8WU68 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC26.23■■□□□ 1.79
U2AF1L4Q8WU68 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
U2AF1L4Q8WU68 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC26.23■■□□□ 1.79
U2AF1L4Q8WU68 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
U2AF1L4Q8WU68 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
U2AF1L4Q8WU68 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
U2AF1L4Q8WU68 AC090877.2-201ENST00000558441 1738 ntBASIC26.22■■□□□ 1.79
U2AF1L4Q8WU68 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
U2AF1L4Q8WU68 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
U2AF1L4Q8WU68 ASB1-202ENST00000409297 878 ntTSL 5 BASIC26.22■■□□□ 1.79
U2AF1L4Q8WU68 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC26.22■■□□□ 1.79
U2AF1L4Q8WU68 AL137784.2-201ENST00000607332 1000 ntBASIC26.22■■□□□ 1.79
U2AF1L4Q8WU68 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.22■■□□□ 1.79
U2AF1L4Q8WU68 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
U2AF1L4Q8WU68 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
U2AF1L4Q8WU68 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
U2AF1L4Q8WU68 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
U2AF1L4Q8WU68 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
U2AF1L4Q8WU68 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
U2AF1L4Q8WU68 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC26.21■■□□□ 1.79
U2AF1L4Q8WU68 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC26.21■■□□□ 1.79
U2AF1L4Q8WU68 SP2-202ENST00000613139 908 ntTSL 5 BASIC26.21■■□□□ 1.79
U2AF1L4Q8WU68 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
U2AF1L4Q8WU68 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
U2AF1L4Q8WU68 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
U2AF1L4Q8WU68 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC26.2■■□□□ 1.79
U2AF1L4Q8WU68 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC26.2■■□□□ 1.79
U2AF1L4Q8WU68 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
U2AF1L4Q8WU68 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
U2AF1L4Q8WU68 AC099791.1-201ENST00000416440 715 ntBASIC26.2■■□□□ 1.78
U2AF1L4Q8WU68 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC26.2■■□□□ 1.78
U2AF1L4Q8WU68 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC26.2■■□□□ 1.78
U2AF1L4Q8WU68 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
U2AF1L4Q8WU68 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
U2AF1L4Q8WU68 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
U2AF1L4Q8WU68 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
U2AF1L4Q8WU68 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.19■■□□□ 1.78
U2AF1L4Q8WU68 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms