Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 MICB-204ENST00000538442 2411 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.771e-6■■■■□ 24.3
SND1Q7KZF4 POGLUT1-205ENST00000476573 567 ntTSL 410.12□□□□□ -0.791e-6■■■■□ 24.3
SND1Q7KZF4 SPTLC3-204ENST00000450297 645 ntTSL 310□□□□□ -0.811e-6■■■■□ 24.3
SND1Q7KZF4 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.861e-6■■■■□ 24.3
SND1Q7KZF4 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.941e-6■■■■□ 24.3
SND1Q7KZF4 GGH-203ENST00000518466 696 ntTSL 38.99□□□□□ -0.975e-8■■■■□ 24.3
SND1Q7KZF4 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.031e-6■■■■□ 24.3
SND1Q7KZF4 XRCC5-209ENST00000485763 616 ntTSL 28.27□□□□□ -1.091e-6■■■■□ 24.3
SND1Q7KZF4 KIAA0319L-212ENST00000473844 513 ntTSL 37.92□□□□□ -1.141e-6■■■■□ 24.3
SND1Q7KZF4 EXT2-204ENST00000525559 448 ntTSL 27.41□□□□□ -1.225e-7■■■■□ 24.3
SND1Q7KZF4 KIAA0319L-213ENST00000474856 295 ntTSL 36.59□□□□□ -1.351e-6■■■■□ 24.3
SND1Q7KZF4 ATP2B4-207ENST00000484746 4697 ntTSL 1 (best)6.09□□□□□ -1.432e-8■■■■□ 24.3
SND1Q7KZF4 GCNT3-207ENST00000560210 501 ntTSL 35.86□□□□□ -1.471e-6■■■■□ 24.3
SND1Q7KZF4 DEGS1-204ENST00000465848 633 ntTSL 25.63□□□□□ -1.517e-7■■■■□ 24.3
SND1Q7KZF4 HSP90B1-206ENST00000550479 698 ntTSL 28.15□□□□□ -1.12e-17■■■■□ 24.3
SND1Q7KZF4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.811e-6■■■■□ 24.3
SND1Q7KZF4 SIL1-215ENST00000515008 843 ntTSL 318.22■□□□□ 0.511e-9■■■■□ 24.3
SND1Q7KZF4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.461e-6■■■■□ 24.3
SND1Q7KZF4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.75■□□□□ 0.431e-6■■■■□ 24.3
SND1Q7KZF4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.41e-6■■■■□ 24.3
SND1Q7KZF4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.811e-6■■■■□ 24.3
SND1Q7KZF4 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.91e-6■■■■□ 24.3
SND1Q7KZF4 C6orf89-202ENST00000359359 2565 ntTSL 5 BASIC8.92□□□□□ -0.981e-6■■■■□ 24.3
SND1Q7KZF4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.863e-7■■■■□ 24.2
SND1Q7KZF4 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.23e-7■■■■□ 24.2
SND1Q7KZF4 BTD-201ENST00000303498 2075 ntTSL 1 (best) BASIC13□□□□□ -0.333e-7■■■■□ 24.2
SND1Q7KZF4 BTD-206ENST00000437172 2097 ntTSL 2 BASIC11.28□□□□□ -0.63e-7■■■■□ 24.2
SND1Q7KZF4 SERPINA3-207ENST00000556388 480 ntTSL 48.95□□□□□ -0.985e-59■■■■□ 24.2
SND1Q7KZF4 MGST1-218ENST00000543076 406 ntTSL 315.04■□□□□ -03e-12■■■■□ 24.2
SND1Q7KZF4 MGST1-213ENST00000539036 566 ntTSL 412.11□□□□□ -0.473e-12■■■■□ 24.2
SND1Q7KZF4 MGST1-204ENST00000396209 979 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.643e-12■■■■□ 24.2
SND1Q7KZF4 MGST1-217ENST00000542256 933 ntTSL 1 (best)10.83□□□□□ -0.683e-12■■■■□ 24.2
SND1Q7KZF4 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.823e-12■■■■□ 24.2
SND1Q7KZF4 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.043e-12■■■■□ 24.2
SND1Q7KZF4 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.043e-12■■■■□ 24.2
SND1Q7KZF4 MGST1-214ENST00000539708 700 ntTSL 28.51□□□□□ -1.053e-12■■■■□ 24.2
SND1Q7KZF4 MGST1-208ENST00000535624 655 ntTSL 28.51□□□□□ -1.053e-12■■■■□ 24.2
SND1Q7KZF4 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC6.84□□□□□ -1.313e-12■■■■□ 24.2
SND1Q7KZF4 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.94□□□□□ -1.463e-12■■■■□ 24.2
SND1Q7KZF4 MGST1-211ENST00000538857 535 ntTSL 35.87□□□□□ -1.473e-12■■■■□ 24.2
SND1Q7KZF4 ERLIN2-208ENST00000521644 1602 ntTSL 520.8■□□□□ 0.923e-7■■■■□ 24.2
SND1Q7KZF4 ERLIN2-206ENST00000519638 1718 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.563e-7■■■■□ 24.2
SND1Q7KZF4 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.183e-7■■■■□ 24.2
SND1Q7KZF4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC24.24■■□□□ 1.472e-6■■■■□ 24.2
SND1Q7KZF4 GALC-214ENST00000557316 1874 ntTSL 523.91■■□□□ 1.422e-6■■■■□ 24.2
SND1Q7KZF4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.332e-6■■■■□ 24.2
SND1Q7KZF4 RUNX1-216ENST00000482318 1710 ntTSL 1 (best)23.16■■□□□ 1.32e-7■■■■□ 24.2
SND1Q7KZF4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.51■■□□□ 1.192e-6■■■■□ 24.2
SND1Q7KZF4 GALC-216ENST00000622264 1221 ntTSL 1 (best)22.33■■□□□ 1.172e-6■■■■□ 24.2
SND1Q7KZF4 GALC-204ENST00000474294 1263 ntTSL 1 (best)21.74■■□□□ 1.072e-6■■■■□ 24.2
SND1Q7KZF4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.41■■□□□ 1.022e-6■■■■□ 24.2
SND1Q7KZF4 GALC-213ENST00000556879 595 ntTSL 420.8■□□□□ 0.922e-6■■■■□ 24.2
SND1Q7KZF4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.92e-6■■■■□ 24.2
SND1Q7KZF4 EIF2B3-206ENST00000480675 1082 ntTSL 519.67■□□□□ 0.742e-6■■■■□ 24.2
SND1Q7KZF4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.712e-7■■■■□ 24.2
SND1Q7KZF4 GALC-207ENST00000554372 717 ntTSL 519.04■□□□□ 0.642e-6■■■■□ 24.2
SND1Q7KZF4 PMPCA-204ENST00000444897 2316 ntTSL 218.17■□□□□ 0.52e-6■■■■□ 24.2
SND1Q7KZF4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.492e-7■■■■□ 24.2
SND1Q7KZF4 VSIR-202ENST00000470317 758 ntTSL 517.37■□□□□ 0.372e-6■■■■□ 24.2
SND1Q7KZF4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.23■□□□□ 0.352e-6■■■■□ 24.2
SND1Q7KZF4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.05■□□□□ 0.322e-6■■■■□ 24.2
SND1Q7KZF4 FLNC-203ENST00000388853 570 ntTSL 216.69■□□□□ 0.262e-6■■■■□ 24.2
SND1Q7KZF4 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.152e-6■■■■□ 24.2
SND1Q7KZF4 GALC-206ENST00000544807 2528 ntTSL 2 BASIC15.96■□□□□ 0.142e-6■■■■□ 24.2
SND1Q7KZF4 EIF2B3-205ENST00000477953 828 ntTSL 515.8■□□□□ 0.122e-6■■■■□ 24.2
SND1Q7KZF4 CENPA-206ENST00000475662 1208 ntTSL 215.66■□□□□ 0.14e-8■■■■□ 24.2
SND1Q7KZF4 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.052e-6■■■■□ 24.2
SND1Q7KZF4 PMPCA-205ENST00000462616 3341 ntTSL 214.87□□□□□ -0.032e-6■■■■□ 24.2
SND1Q7KZF4 ABCC1-205ENST00000574224 1543 ntTSL 1 (best)12.94□□□□□ -0.344e-8■■■■□ 24.2
SND1Q7KZF4 SLC35F6-201ENST00000344420 3898 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.344e-8■■■■□ 24.2
SND1Q7KZF4 DHX15-201ENST00000336812 2994 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.422e-6■■■■□ 24.2
SND1Q7KZF4 SLC35F6-203ENST00000429494 3738 ntTSL 1 (best)11.94□□□□□ -0.54e-8■■■■□ 24.2
SND1Q7KZF4 RAB7A-206ENST00000490093 359 ntTSL 511.11□□□□□ -0.632e-6■■■■□ 24.2
SND1Q7KZF4 SLC35F6-202ENST00000414029 3605 ntTSL 1 (best)10.45□□□□□ -0.744e-8■■■■□ 24.2
SND1Q7KZF4 GALC-203ENST00000393569 2547 ntTSL 2 BASIC10.34□□□□□ -0.752e-6■■■■□ 24.2
SND1Q7KZF4 ACTL6A-208ENST00000479056 565 ntTSL 49.67□□□□□ -0.862e-6■■■■□ 24.2
SND1Q7KZF4 G3BP2-207ENST00000507133 598 ntTSL 38.71□□□□□ -1.022e-6■■■■□ 24.2
SND1Q7KZF4 ERO1A-210ENST00000557178 571 ntTSL 58.68□□□□□ -1.022e-6■■■■□ 24.2
SND1Q7KZF4 RAB7A-202ENST00000464496 576 ntTSL 28.67□□□□□ -1.022e-6■■■■□ 24.2
SND1Q7KZF4 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC7.22□□□□□ -1.252e-6■■■■□ 24.2
SND1Q7KZF4 GALC-208ENST00000554916 631 ntTSL 57.15□□□□□ -1.262e-6■■■■□ 24.2
SND1Q7KZF4 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC7.07□□□□□ -1.282e-6■■■■□ 24.2
SND1Q7KZF4 ALG5-203ENST00000460230 687 ntTSL 26.4□□□□□ -1.382e-6■■■■□ 24.2
SND1Q7KZF4 GALC-212ENST00000556261 567 ntTSL 36.4□□□□□ -1.382e-6■■■■□ 24.2
SND1Q7KZF4 DHX15-204ENST00000508032 3028 ntTSL 1 (best)4.29□□□□□ -1.722e-6■■■■□ 24.2
SND1Q7KZF4 TMEM161A-213ENST00000591443 657 ntTSL 217.65■□□□□ 0.421e-7■■■■□ 24.2
SND1Q7KZF4 P4HB-202ENST00000415593 1669 ntTSL 1 (best)18.19■□□□□ 0.53e-22■■■■□ 24.2
SND1Q7KZF4 HEXA-212ENST00000568260 674 ntTSL 313.06□□□□□ -0.321e-7■■■■□ 24.2
SND1Q7KZF4 FGG-212ENST00000492082 2031 ntTSL 59.65□□□□□ -0.862e-25■■■■□ 24.2
SND1Q7KZF4 FGG-203ENST00000404648 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.962e-25■■■■□ 24.2
SND1Q7KZF4 FGG-204ENST00000405164 1539 ntTSL 5 BASIC8.37□□□□□ -1.072e-25■■■■□ 24.2
SND1Q7KZF4 APOH-203ENST00000581797 748 ntTSL 38.22□□□□□ -1.093e-37■■■■□ 24.2
SND1Q7KZF4 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC7.57□□□□□ -1.21e-9■■■■□ 24.1
SND1Q7KZF4 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.93□□□□□ -1.461e-9■■■■□ 24.1
SND1Q7KZF4 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.42e-6■■■■□ 24.1
SND1Q7KZF4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.05■□□□□ 0.487e-15■■■■□ 24.1
SND1Q7KZF4 CYBA-204ENST00000563526 1052 ntTSL 216.02■□□□□ 0.167e-15■■■■□ 24.1
SND1Q7KZF4 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.42■□□□□ 0.067e-15■■■■□ 24.1
SND1Q7KZF4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.431e-7■■■■□ 24.1
SND1Q7KZF4 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.24■□□□□ 0.351e-7■■■■□ 24.1
Retrieved 100 of 13,567 protein–RNA pairs in 86.4 ms