RNA–Protein interactions for RNA: ENST00000462616.1

PMPCA-205, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2

Gene PMPCA, Length 3,341 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-205ENST00000462616 NISCHQ9Y2I1 1504 aa26.13■■□□□ 1.77
PMPCA-205ENST00000462616 CCDC180Q9P1Z9 1646 aa23.16■■□□□ 1.3
PMPCA-205ENST00000462616 SHROOM4Q9ULL8 1493 aa22.8■■□□□ 1.24
PMPCA-205ENST00000462616 SUPT5HO00267 1087 aaKnown RBP22.65■■□□□ 1.22
PMPCA-205ENST00000462616 HRCP23327 699 aa22.08■■□□□ 1.13
PMPCA-205ENST00000462616 PCGF6Q9BYE7 350 aa22.06■■□□□ 1.12
PMPCA-205ENST00000462616 ZCCHC6Q5VYS8 1495 aaKnown RBP21.94■■□□□ 1.1
PMPCA-205ENST00000462616 DCAF8L2P0C7V8 631 aa21.94■■□□□ 1.1
PMPCA-205ENST00000462616 PPARGC1BQ86YN6 1023 aaKnown RBP21.91■■□□□ 1.1
PMPCA-205ENST00000462616 CHIC1Q5VXU3 224 aa21.88■■□□□ 1.09
PMPCA-205ENST00000462616 DCAF1Q9Y4B6 1507 aa21.83■■□□□ 1.09
PMPCA-205ENST00000462616 MYO15BQ96JP2 1530 aa21.82■■□□□ 1.08
PMPCA-205ENST00000462616 ABCC9O60706 1549 aa21.69■■□□□ 1.06
PMPCA-205ENST00000462616 LOC105371045A0A1W2PR82 267 aa21.57■■□□□ 1.04
PMPCA-205ENST00000462616 NACADO15069 1562 aa21.53■■□□□ 1.04
PMPCA-205ENST00000462616 RB1CC1Q8TDY2 1594 aa21.36■■□□□ 1.01
PMPCA-205ENST00000462616 TRIM26Q12899 539 aaPredicted RBP21.19■□□□□ 0.98
PMPCA-205ENST00000462616 EHMT2Q96KQ7 1210 aa21.15■□□□□ 0.98
PMPCA-205ENST00000462616 FAM9AQ8IZU1 332 aaPredicted RBP21.04■□□□□ 0.96
PMPCA-205ENST00000462616 UNC13AQ9UPW8 1703 aa20.95■□□□□ 0.94
PMPCA-205ENST00000462616 SCRIBQ14160 1630 aa20.9■□□□□ 0.94
PMPCA-205ENST00000462616 ZEB1P37275 1124 aaPredicted RBP20.84■□□□□ 0.93
PMPCA-205ENST00000462616 TRIM41Q8WV44 630 aa20.84■□□□□ 0.93
PMPCA-205ENST00000462616 SCAF1Q9H7N4 1312 aaKnown RBP20.8■□□□□ 0.92
PMPCA-205ENST00000462616 PELP1Q8IZL8 1130 aaKnown RBP20.73■□□□□ 0.91
PMPCA-205ENST00000462616 BICRAQ9NZM4 1560 aa20.71■□□□□ 0.91
PMPCA-205ENST00000462616 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.55■□□□□ 0.88
PMPCA-205ENST00000462616 TTBK1Q5TCY1 1321 aaPredicted RBP20.54■□□□□ 0.88
PMPCA-205ENST00000462616 CCER1Q8TC90 406 aaPredicted RBP20.5■□□□□ 0.87
PMPCA-205ENST00000462616 NEUROD1Q13562 356 aa20.4■□□□□ 0.86
PMPCA-205ENST00000462616 RSF1Q96T23 1441 aaPredicted RBP20.39■□□□□ 0.85
PMPCA-205ENST00000462616 ACIN1Q9UKV3 1341 aaKnown RBP20.35■□□□□ 0.85
PMPCA-205ENST00000462616 GTF3C3Q9Y5Q9 886 aa20.31■□□□□ 0.84
PMPCA-205ENST00000462616 DIEXFQ68CQ4 756 aaKnown RBP20.27■□□□□ 0.84
PMPCA-205ENST00000462616 PABPN1Q86U42 306 aaKnown RBP eCLIP20.24■□□□□ 0.83
PMPCA-205ENST00000462616 BAZ1AQ9NRL2 1556 aaPredicted RBP20.23■□□□□ 0.83
PMPCA-205ENST00000462616 CENPBP07199 599 aaPredicted RBP20.22■□□□□ 0.83
PMPCA-205ENST00000462616 SMARCA4P51532 1647 aa20.18■□□□□ 0.82
PMPCA-205ENST00000462616 YTHDC1Q96MU7 727 aaKnown RBP20.18■□□□□ 0.82
PMPCA-205ENST00000462616 CECR2Q9BXF3 1484 aa20.16■□□□□ 0.82
PMPCA-205ENST00000462616 PEG3Q9GZU2 1588 aa20.1■□□□□ 0.81
PMPCA-205ENST00000462616 MROH2BQ7Z745 1585 aa20.08■□□□□ 0.81
PMPCA-205ENST00000462616 EIF4G1Q04637 1599 aaKnown RBP20.07■□□□□ 0.8
PMPCA-205ENST00000462616 SMARCA2P51531 1590 aa19.92■□□□□ 0.78
PMPCA-205ENST00000462616 UBTFP17480 764 aaKnown RBP19.91■□□□□ 0.78
PMPCA-205ENST00000462616 WIZO95785 1651 aa19.91■□□□□ 0.78
PMPCA-205ENST00000462616 ZNF316A6NFI3 1004 aaPredicted RBP19.87■□□□□ 0.77
PMPCA-205ENST00000462616 HNRNPUL2Q1KMD3 747 aaKnown RBP19.85■□□□□ 0.77
PMPCA-205ENST00000462616 ATAD2BQ9ULI0 1458 aa19.85■□□□□ 0.77
PMPCA-205ENST00000462616 HMGXB3Q12766 1538 aa19.84■□□□□ 0.77
PMPCA-205ENST00000462616 TOP2AP11388 1531 aaKnown RBP19.82■□□□□ 0.76
PMPCA-205ENST00000462616 CC2D2AQ9P2K1 1620 aa19.81■□□□□ 0.76
PMPCA-205ENST00000462616 NCAPD3P42695 1498 aa19.81■□□□□ 0.76
PMPCA-205ENST00000462616 MIER1Q8N108 512 aa19.79■□□□□ 0.76
PMPCA-205ENST00000462616 RANGAP1P46060 587 aaPredicted RBP19.76■□□□□ 0.75
PMPCA-205ENST00000462616 MYT1Q01538 1121 aa19.76■□□□□ 0.75
PMPCA-205ENST00000462616 CEP162Q5TB80 1403 aa19.72■□□□□ 0.75
PMPCA-205ENST00000462616 BAZ1BQ9UIG0 1483 aaKnown RBP19.68■□□□□ 0.74
PMPCA-205ENST00000462616 ABCC8Q09428 1581 aa19.67■□□□□ 0.74
PMPCA-205ENST00000462616 CCDC88BA6NC98 1476 aa19.67■□□□□ 0.74
PMPCA-205ENST00000462616 SOGA1O94964 1423 aa19.65■□□□□ 0.74
PMPCA-205ENST00000462616 CSRNP3Q8WYN3 585 aa19.64■□□□□ 0.73
PMPCA-205ENST00000462616 WRNQ14191 1432 aaPredicted RBP eCLIP19.55■□□□□ 0.72
PMPCA-205ENST00000462616 APLP2Q06481 763 aa19.54■□□□□ 0.72
PMPCA-205ENST00000462616 TNIKQ9UKE5 1360 aa19.53■□□□□ 0.72
PMPCA-205ENST00000462616 RUSC2Q8N2Y8 1516 aa19.53■□□□□ 0.72
PMPCA-205ENST00000462616 PRDM2Q13029 1718 aa19.35■□□□□ 0.69
PMPCA-205ENST00000462616 GOLGA3Q08378 1498 aa19.33■□□□□ 0.68
PMPCA-205ENST00000462616 DNAJC5BQ9UF47 199 aa19.31■□□□□ 0.68
PMPCA-205ENST00000462616 SUPT16HQ9Y5B9 1047 aaKnown RBP19.29■□□□□ 0.68
PMPCA-205ENST00000462616 CLIP1P30622 1438 aa19.29■□□□□ 0.68
PMPCA-205ENST00000462616 ITGAEP38570 1179 aa19.27■□□□□ 0.68
PMPCA-205ENST00000462616 CFTRP13569 1480 aa19.25■□□□□ 0.67
PMPCA-205ENST00000462616 EEA1Q15075 1411 aa19.25■□□□□ 0.67
PMPCA-205ENST00000462616 BCANQ96GW7 911 aa19.24■□□□□ 0.67
PMPCA-205ENST00000462616 LAMC3Q9Y6N6 1575 aa19.23■□□□□ 0.67
PMPCA-205ENST00000462616 CADPSQ9ULU8 1353 aa19.17■□□□□ 0.66
PMPCA-205ENST00000462616 KCNH8Q96L42 1107 aa19.14■□□□□ 0.65
PMPCA-205ENST00000462616 CEP164Q9UPV0 1460 aa19.13■□□□□ 0.65
PMPCA-205ENST00000462616 VPS8Q8N3P4 1428 aa19.13■□□□□ 0.65
PMPCA-205ENST00000462616 TSHZ2Q9NRE2 1034 aa19.12■□□□□ 0.65
PMPCA-205ENST00000462616 KANK4Q5T7N3 995 aaPredicted RBP19.08■□□□□ 0.65
PMPCA-205ENST00000462616 RAPGEF2Q9Y4G8 1499 aa19.07■□□□□ 0.64
PMPCA-205ENST00000462616 DHX57Q6P158 1386 aaKnown RBP19.06■□□□□ 0.64
PMPCA-205ENST00000462616 FKBP8Q14318 412 aa19■□□□□ 0.63
PMPCA-205ENST00000462616 ANP32EQ9BTT0 268 aa18.99■□□□□ 0.63
PMPCA-205ENST00000462616 CLSPNQ9HAW4 1339 aa18.99■□□□□ 0.63
PMPCA-205ENST00000462616 NESP48681 1621 aa18.98■□□□□ 0.63
PMPCA-205ENST00000462616 DDX10Q13206 875 aaKnown RBP18.97■□□□□ 0.63
PMPCA-205ENST00000462616 SYNJ1O43426 1573 aa18.97■□□□□ 0.63
PMPCA-205ENST00000462616 BIVM-ERCC5R4GMW8 1640 aa18.95■□□□□ 0.62
PMPCA-205ENST00000462616 HIRIP3Q9BW71 556 aaPredicted RBP18.95■□□□□ 0.62
PMPCA-205ENST00000462616 PDS5BQ9NTI5 1447 aa18.95■□□□□ 0.62
PMPCA-205ENST00000462616 FANCD2Q9BXW9 1451 aa18.94■□□□□ 0.62
PMPCA-205ENST00000462616 KIF21BO75037 1637 aa18.93■□□□□ 0.62
PMPCA-205ENST00000462616 KIF21AQ7Z4S6 1674 aa18.93■□□□□ 0.62
PMPCA-205ENST00000462616 TOP2BQ02880 1626 aa18.9■□□□□ 0.62
PMPCA-205ENST00000462616 TRIM52Q96A61 297 aa18.89■□□□□ 0.62
PMPCA-205ENST00000462616 NEFLP07196 543 aa18.87■□□□□ 0.61
PMPCA-205ENST00000462616 ATP1B4Q9UN42 357 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms