RNA–Protein interactions for RNA: ENST00000484746.1

ATP2B4-207, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best)

Gene ATP2B4, Length 4,697 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-207ENST00000484746 NISCHQ9Y2I1 1504 aa11.06□□□□□ -0.64
ATP2B4-207ENST00000484746 DCAF8L2P0C7V8 631 aa10.13□□□□□ -0.79
ATP2B4-207ENST00000484746 SHROOM4Q9ULL8 1493 aa9.74□□□□□ -0.85
ATP2B4-207ENST00000484746 SUPT5HO00267 1087 aaKnown RBP9.66□□□□□ -0.86
ATP2B4-207ENST00000484746 CCDC180Q9P1Z9 1646 aa9.36□□□□□ -0.91
ATP2B4-207ENST00000484746 ABCC9O60706 1549 aa9.24□□□□□ -0.93
ATP2B4-207ENST00000484746 ZCCHC6Q5VYS8 1495 aaKnown RBP9.22□□□□□ -0.93
ATP2B4-207ENST00000484746 PPARGC1BQ86YN6 1023 aaKnown RBP9.06□□□□□ -0.96
ATP2B4-207ENST00000484746 TRIM41Q8WV44 630 aa9.04□□□□□ -0.96
ATP2B4-207ENST00000484746 PELP1Q8IZL8 1130 aaKnown RBP9.04□□□□□ -0.96
ATP2B4-207ENST00000484746 HRCP23327 699 aa9.01□□□□□ -0.97
ATP2B4-207ENST00000484746 PCGF6Q9BYE7 350 aa9□□□□□ -0.97
ATP2B4-207ENST00000484746 FAM9AQ8IZU1 332 aaPredicted RBP9□□□□□ -0.97
ATP2B4-207ENST00000484746 EHMT2Q96KQ7 1210 aa9□□□□□ -0.97
ATP2B4-207ENST00000484746 DCAF1Q9Y4B6 1507 aa8.97□□□□□ -0.97
ATP2B4-207ENST00000484746 SCRIBQ14160 1630 aa8.95□□□□□ -0.98
ATP2B4-207ENST00000484746 CHIC1Q5VXU3 224 aa8.95□□□□□ -0.98
ATP2B4-207ENST00000484746 PABPN1Q86U42 306 aaKnown RBP eCLIP8.94□□□□□ -0.98
ATP2B4-207ENST00000484746 NACADO15069 1562 aa8.91□□□□□ -0.98
ATP2B4-207ENST00000484746 RB1CC1Q8TDY2 1594 aa8.89□□□□□ -0.99
ATP2B4-207ENST00000484746 MYT1Q01538 1121 aa8.84□□□□□ -0.99
ATP2B4-207ENST00000484746 APLP2Q06481 763 aa8.84□□□□□ -0.99
ATP2B4-207ENST00000484746 UBTFP17480 764 aaKnown RBP8.78□□□□□ -1
ATP2B4-207ENST00000484746 MYO15BQ96JP2 1530 aa8.78□□□□□ -1
ATP2B4-207ENST00000484746 LOC105371045A0A1W2PR82 267 aa8.73□□□□□ -1.01
ATP2B4-207ENST00000484746 RSF1Q96T23 1441 aaPredicted RBP8.72□□□□□ -1.01
ATP2B4-207ENST00000484746 RANGAP1P46060 587 aaPredicted RBP8.7□□□□□ -1.02
ATP2B4-207ENST00000484746 TTBK1Q5TCY1 1321 aaPredicted RBP8.67□□□□□ -1.02
ATP2B4-207ENST00000484746 SCAF1Q9H7N4 1312 aaKnown RBP8.64□□□□□ -1.03
ATP2B4-207ENST00000484746 BAZ1AQ9NRL2 1556 aaPredicted RBP8.62□□□□□ -1.03
ATP2B4-207ENST00000484746 TRIM26Q12899 539 aaPredicted RBP8.62□□□□□ -1.03
ATP2B4-207ENST00000484746 CECR2Q9BXF3 1484 aa8.61□□□□□ -1.03
ATP2B4-207ENST00000484746 ZEB1P37275 1124 aaPredicted RBP8.6□□□□□ -1.03
ATP2B4-207ENST00000484746 ATP1B4Q9UN42 357 aaPredicted RBP8.58□□□□□ -1.04
ATP2B4-207ENST00000484746 CSRNP3Q8WYN3 585 aa8.54□□□□□ -1.04
ATP2B4-207ENST00000484746 MROH2BQ7Z745 1585 aa8.54□□□□□ -1.04
ATP2B4-207ENST00000484746 CCER1Q8TC90 406 aaPredicted RBP8.53□□□□□ -1.04
ATP2B4-207ENST00000484746 BAZ1BQ9UIG0 1483 aaKnown RBP8.52□□□□□ -1.05
ATP2B4-207ENST00000484746 SMARCA2P51531 1590 aa8.43□□□□□ -1.06
ATP2B4-207ENST00000484746 WIZO95785 1651 aa8.43□□□□□ -1.06
ATP2B4-207ENST00000484746 NEUROD1Q13562 356 aa8.42□□□□□ -1.06
ATP2B4-207ENST00000484746 GTF3C3Q9Y5Q9 886 aa8.42□□□□□ -1.06
ATP2B4-207ENST00000484746 WRNQ14191 1432 aaPredicted RBP eCLIP8.42□□□□□ -1.06
ATP2B4-207ENST00000484746 EEA1Q15075 1411 aa8.42□□□□□ -1.06
ATP2B4-207ENST00000484746 TOP2AP11388 1531 aaKnown RBP8.42□□□□□ -1.06
ATP2B4-207ENST00000484746 SMARCA4P51532 1647 aa8.41□□□□□ -1.06
ATP2B4-207ENST00000484746 CCDC88BA6NC98 1476 aa8.41□□□□□ -1.06
ATP2B4-207ENST00000484746 HNRNPUL2Q1KMD3 747 aaKnown RBP8.37□□□□□ -1.07
ATP2B4-207ENST00000484746 ACIN1Q9UKV3 1341 aaKnown RBP8.36□□□□□ -1.07
ATP2B4-207ENST00000484746 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.36□□□□□ -1.07
ATP2B4-207ENST00000484746 ATAD2BQ9ULI0 1458 aa8.35□□□□□ -1.07
ATP2B4-207ENST00000484746 YTHDC1Q96MU7 727 aaKnown RBP8.35□□□□□ -1.07
ATP2B4-207ENST00000484746 ITGAEP38570 1179 aa8.34□□□□□ -1.07
ATP2B4-207ENST00000484746 GOLGA3Q08378 1498 aa8.31□□□□□ -1.08
ATP2B4-207ENST00000484746 KIF27Q86VH2 1401 aa8.29□□□□□ -1.08
ATP2B4-207ENST00000484746 CENPBP07199 599 aaPredicted RBP8.29□□□□□ -1.08
ATP2B4-207ENST00000484746 TNIKQ9UKE5 1360 aa8.28□□□□□ -1.08
ATP2B4-207ENST00000484746 CEP164Q9UPV0 1460 aa8.28□□□□□ -1.08
ATP2B4-207ENST00000484746 ABCC8Q09428 1581 aa8.28□□□□□ -1.08
ATP2B4-207ENST00000484746 FBLN2P98095 1184 aa8.28□□□□□ -1.08
ATP2B4-207ENST00000484746 P3H3Q8IVL6 736 aa8.28□□□□□ -1.08
ATP2B4-207ENST00000484746 CLIP1P30622 1438 aa8.27□□□□□ -1.09
ATP2B4-207ENST00000484746 FAM50AQ14320 339 aaKnown RBP8.26□□□□□ -1.09
ATP2B4-207ENST00000484746 CEP162Q5TB80 1403 aa8.26□□□□□ -1.09
ATP2B4-207ENST00000484746 SOGA1O94964 1423 aa8.25□□□□□ -1.09
ATP2B4-207ENST00000484746 DIEXFQ68CQ4 756 aaKnown RBP8.25□□□□□ -1.09
ATP2B4-207ENST00000484746 CADPSQ9ULU8 1353 aa8.23□□□□□ -1.09
ATP2B4-207ENST00000484746 NCAPD3P42695 1498 aa8.23□□□□□ -1.09
ATP2B4-207ENST00000484746 EIF4G1Q04637 1599 aaKnown RBP8.22□□□□□ -1.09
ATP2B4-207ENST00000484746 BICRAQ9NZM4 1560 aa8.22□□□□□ -1.09
ATP2B4-207ENST00000484746 CUX2O14529 1486 aa8.19□□□□□ -1.1
ATP2B4-207ENST00000484746 PDS5BQ9NTI5 1447 aa8.19□□□□□ -1.1
ATP2B4-207ENST00000484746 CDK11AQ9UQ88 783 aaPredicted RBP8.17□□□□□ -1.1
ATP2B4-207ENST00000484746 CARMIL1Q5VZK9 1371 aa8.16□□□□□ -1.1
ATP2B4-207ENST00000484746 CHMP7Q8WUX9 453 aaPredicted RBP8.15□□□□□ -1.1
ATP2B4-207ENST00000484746 BCL11AQ9H165 835 aa8.15□□□□□ -1.1
ATP2B4-207ENST00000484746 ERCC6Q03468 1493 aa8.15□□□□□ -1.1
ATP2B4-207ENST00000484746 MYT1LQ9UL68 1186 aa8.15□□□□□ -1.1
ATP2B4-207ENST00000484746 UNC13AQ9UPW8 1703 aa8.14□□□□□ -1.11
ATP2B4-207ENST00000484746 HMGXB3Q12766 1538 aa8.13□□□□□ -1.11
ATP2B4-207ENST00000484746 ARID3CA6NKF2 412 aa8.13□□□□□ -1.11
ATP2B4-207ENST00000484746 TRIM52Q96A61 297 aa8.13□□□□□ -1.11
ATP2B4-207ENST00000484746 FANCD2Q9BXW9 1451 aa8.11□□□□□ -1.11
ATP2B4-207ENST00000484746 MTUS2Q5JR59 1369 aa8.1□□□□□ -1.11
ATP2B4-207ENST00000484746 RUSC2Q8N2Y8 1516 aa8.09□□□□□ -1.11
ATP2B4-207ENST00000484746 PEG3Q9GZU2 1588 aa8.08□□□□□ -1.12
ATP2B4-207ENST00000484746 VPS8Q8N3P4 1428 aa8.08□□□□□ -1.12
ATP2B4-207ENST00000484746 PRKCSHP14314 528 aaPredicted RBP8.08□□□□□ -1.12
ATP2B4-207ENST00000484746 CFTRP13569 1480 aa8.08□□□□□ -1.12
ATP2B4-207ENST00000484746 FHAD1B1AJZ9 1412 aa8.08□□□□□ -1.12
ATP2B4-207ENST00000484746 CC2D2AQ9P2K1 1620 aa8.07□□□□□ -1.12
ATP2B4-207ENST00000484746 TDRD9Q8NDG6 1382 aaKnown RBP8.06□□□□□ -1.12
ATP2B4-207ENST00000484746 RAPGEF2Q9Y4G8 1499 aa8.06□□□□□ -1.12
ATP2B4-207ENST00000484746 ZNF777Q9ULD5 760 aaPredicted RBP8.05□□□□□ -1.12
ATP2B4-207ENST00000484746 ZNF316A6NFI3 1004 aaPredicted RBP8.05□□□□□ -1.12
ATP2B4-207ENST00000484746 MIER1Q8N108 512 aa8.05□□□□□ -1.12
ATP2B4-207ENST00000484746 ERICH6Q7L0X2 663 aa8.03□□□□□ -1.12
ATP2B4-207ENST00000484746 FGD5Q6ZNL6 1462 aa8.03□□□□□ -1.12
ATP2B4-207ENST00000484746 SYNJ1O43426 1573 aa8.02□□□□□ -1.13
ATP2B4-207ENST00000484746 IGF1RP08069 1367 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms